RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 DHODHQ02127 395 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PLEKHG6Q3KR16 790 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CIAPIN1Q6FI81 312 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ANKS1BQ7Z6G8 1248 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 LSM14AQ8ND56 463 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 NPLOC4Q8TAT6 608 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MR1Q95460 341 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 VAT1Q99536 393 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 RIT2Q99578 217 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ADAM7Q9H2U9 754 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CYP8B1Q9UNU6 501 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ERVK-11Q9UQG0 969 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SQORQ9Y6N5 450 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ERI2A8K979 691 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 CENPBD1B2RD01 187 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SYNGR4O95473 234 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SRPRAP08240 638 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 COL6A1P12109 1028 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ADH6P28332 368 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 HSD11B1P28845 292 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TSFMP43897 325 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 GLRBP48167 497 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SLC26A2P50443 739 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 NFKB2Q00653 900 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ZNF827Q17R98 1081 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PAN3Q58A45 887 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 REP15Q6BDI9 236 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 RTL6Q6ICC9 239 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PLET1Q6UQ28 207 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MRPL21Q7Z2W9 205 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 ZNF554Q86TJ5 538 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 C11orf74Q86VG3 221 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PDZD9Q8IXQ8 264 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 KCNQ5Q9NR82 932 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 C1orf109Q9NX04 203 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 LYVE1Q9Y5Y7 322 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 HTR3EA5X5Y0 456 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 FAM228BP0C875 321 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 UQCRC1P31930 480 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MARSP56192 900 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 SEMA3AQ14563 771 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 GALNTL6Q49A17 601 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 HYIQ5T013 277 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SLC30A10Q6XR72 485 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 OR13C9Q8NGT0 318 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 DNAJB8Q8NHS0 232 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 RNF128Q8TEB7 428 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MFSD3Q96ES6 412 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 C5orf34Q96MH7 638 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 DCUN1D5Q9BTE7 237 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TAS2R1Q9NYW7 299 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ANKRD28O15084 1053 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 OGTO15294 1046 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 CIAO1O76071 339 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 APBA3O96018 575 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 PRKCBP05771 671 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 GPD1P21695 349 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 BUD31P41223 144 aaPredicted RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 ALDH3B1P43353 468 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 YAP1P46937 504 aaKnown RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 NEK3P51956 506 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 PPP2R2BQ00005 443 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 ZNF33AQ06730 810 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 CDK18Q07002 472 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 RPE65Q16518 533 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 AP5B1Q2VPB7 878 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 ZNF311Q5JNZ3 666 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 PRAMEF17Q5VTA0 474 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 TAPT1Q6NXT6 567 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 CEP295NLQ96MC4 621 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 SNCAIPQ9Y6H5 919 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 KDM5DQ9BY66 1539 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 CROCC2H7BZ55 1655 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 MYH13Q9UKX3 1938 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 TRAV19A0A0A6YYK7 116 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 EFCAB9A8MZ26 197 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 TMX2-CTNND1H3BSU7 103 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 FGF10O15520 208 aaPredicted RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 AKR1B1P15121 316 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 EIF4BP23588 611 aaKnown RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 MAGEA8P43361 318 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 PSEN2P49810 448 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 BCAMP50895 628 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 CTBP2P56545 445 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 MALLQ13021 153 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 UBE2NLQ5JXB2 153 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 C6orf141Q5SZD1 244 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 SIX5Q8N196 739 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 KYQ8NBH2 561 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 OR13C3Q8NGS6 347 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 DAZAP1Q96EP5 407 aaKnown RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 WDCPQ9H6R7 721 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 KCNIP1Q9NZI2 227 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 TMX2Q9Y320 296 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 PLEKHM1Q9Y4G2 1056 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 PCDHGA10Q9Y5H3 936 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 INO80Q9ULG1 1556 aaPredicted RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 HELTA6NFD8 242 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 DISC1C4P0D8 188 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 EIF1AYO14602 144 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms