RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TSSK4Q6SA08 328 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 ENOSF1Q7L5Y1 443 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 RBM23Q86U06 439 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 CAMK1DQ8IU85 385 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 TICAM1Q8IUC6 712 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 FAM217AQ8IXS0 508 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 OR8H2Q8N162 312 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 SRBD1Q8N5C6 995 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 HORMAD2Q8N7B1 307 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 TEX45Q8NA69 505 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 NR4A3Q92570 626 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 SGCDQ92629 289 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 LRRC59Q96AG4 307 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 ARHGEF26Q96DR7 871 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 CCDC34Q96HJ3 373 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 PGAM5Q96HS1 289 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 URB1-AS1Q96HZ7 61 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 FEM1CQ96JP0 617 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 C1orf74Q96LT6 269 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 CMTM3Q96MX0 182 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 SIN3AQ96ST3 1273 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 NUF2Q9BZD4 464 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 PDZD7Q9H5P4 517 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 SH2D4AQ9H788 454 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 NKIRAS2Q9NYR9 191 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 ZNF215Q9UL58 517 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 FZD10Q9ULW2 581 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 MTMR6Q9Y217 621 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 TMEM5Q9Y2B1 443 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 RAI2Q9Y5P3 530 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 SNX8Q9Y5X2 465 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 LRRC37A3O60309 1634 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 POLR3AO14802 1390 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 RGPD2P0DJD1 1756 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 TYW5A2RUC4 315 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 RGS14O43566 566 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 HCRTR2O43614 444 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 ZNF432O94892 652 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 PGM3O95394 542 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 ETFAP13804 333 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 ITGAXP20702 1163 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 CHATP28329 748 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 ACSL1P33121 698 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 SHMT1P34896 483 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 ACTN2P35609 894 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 AVPR1AP37288 418 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 RASSF2P50749 326 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 F2RL1P55085 397 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 CDH8P55286 799 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 GPS2Q13227 327 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 LPIN1Q14693 890 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 DRAP1Q14919 205 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 KRT24Q2M2I5 525 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 USP41Q3LFD5 358 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 ESCO2Q56NI9 601 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 OTUD1Q5VV17 481 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 LRRC8EQ6NSJ5 796 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 GLDNQ6ZMI3 551 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 CHST9Q7L1S5 443 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 ZNF329Q86UD4 541 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 TDRPQ86YL5 185 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 LURAP1LQ8IV03 231 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 LSMEM1Q8N8F7 131 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 CEP76Q8TAP6 659 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 TMEM18Q96B42 140 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 OTULINQ96BN8 352 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 FBXL8Q96CD0 374 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 ZC3HAV1LQ96H79 300 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 WDR77Q9BQA1 342 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 KIF9Q9HAQ2 790 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 MAGEE1Q9HCI5 957 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 LSM4Q9Y4Z0 139 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 SESN1Q9Y6P5 492 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 QSER1Q2KHR3 1735 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 SHANK3Q9BYB0 1731 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 RGS12O14924 1447 aa4.12□□□□□ -1.75
CDC42BPA-212ENST00000478573 MAP2P11137 1827 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 FAM237AA0A1B0GTK4 181 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 B4DLN1 442 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 ERVV-2B6SEH9 535 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 STMND1H3BQB6 276 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 SNAP23O00161 211 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 LINC01565O15544 149 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 SPRY3O43610 288 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 HNRNPCL1O60812 293 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 NDUFS3O75489 264 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 GJB3O75712 270 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 PRSS2P07478 247 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 CHRNB2P17787 502 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 MYF6P23409 242 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 HOXA13P31271 388 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 CLCN5P51795 746 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 ART1P52961 327 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 CDH12P55289 794 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 TRAF1Q13077 416 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 IRF3Q14653 427 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 ADIPOQQ15848 244 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 DUSP6Q16828 381 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 SOWAHAQ2M3V2 549 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 COL28A1Q2UY09 1125 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms