RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 CCHCR1Q8TD31 782 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 JPH3Q8WXH2 748 aaPredicted RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 RTP4Q96DX8 246 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 SMIM14Q96QK8 99 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 WDR24Q96S15 920 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 ADGRE3Q9BY15 652 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 ZMYND15Q9H091 742 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 CARD9Q9H257 536 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 TRIT1Q9H3H1 467 aaKnown RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 FAM83DQ9H4H8 585 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 PKD2L2Q9NZM6 624 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 UVRAGQ9P2Y5 699 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 ZNHIT2Q9UHR6 403 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 CAPN11Q9UMQ6 739 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 NENFQ9UMX5 172 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 TMEM184BQ9Y519 407 aaPredicted RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 PCYT1BQ9Y5K3 369 aaPredicted RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 OAS3Q9Y6K5 1087 aaKnown RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 MN1Q10571 1320 aaPredicted RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 FADS2P1A8MWK0 482 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 ZNF487B1APH4 448 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 ANKRD66B4E2M5 251 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 PYCARD-AS1I3L0S3 204 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 NUAK1O60285 661 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 PROSCO94903 275 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 ATP1A1P05023 1023 aaKnown RBP12.85□□□□□ -0.35
ABCF3-212ENST00000478288 MMP2P08253 660 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 MPSTP25325 297 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
ABCF3-212ENST00000478288 POLE2P56282 527 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 PPIDQ08752 370 aaKnown RBP12.85□□□□□ -0.35
ABCF3-212ENST00000478288 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 ABHD18Q0P651 414 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 KCNAB2Q13303 367 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 MAP7Q14244 749 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 QPCTQ16769 361 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 CHST15Q7LFX5 561 aaPredicted RBP12.85□□□□□ -0.35
ABCF3-212ENST00000478288 PHYKPLQ8IUZ5 450 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 CCDC13Q8IYE1 715 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 PQLC3Q8N755 202 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 KCTD6Q8NC69 237 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 LPCAT1Q8NF37 534 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 KIAA1143Q96AT1 154 aaPredicted RBP12.85□□□□□ -0.35
ABCF3-212ENST00000478288 ZNF830Q96NB3 372 aaPredicted RBP12.85□□□□□ -0.35
ABCF3-212ENST00000478288 ZSCAN5AQ9BUG6 496 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 MLPHQ9BV36 600 aaPredicted RBP12.85□□□□□ -0.35
ABCF3-212ENST00000478288 TTLL3Q9Y4R7 772 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 ADGRG1Q9Y653 693 aa12.85□□□□□ -0.35
ABCF3-212ENST00000478288 TOX3O15405 576 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-212ENST00000478288 GRID2O43424 1007 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 ACP5P13686 325 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 CCR10P46092 362 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 UBE2IP63279 158 aaKnown RBP12.84□□□□□ -0.35
ABCF3-212ENST00000478288 TPM4P67936 248 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 IFI35P80217 286 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-212ENST00000478288 NFKB2Q00653 900 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 GBE1Q04446 702 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 ZNF761Q86XN6 746 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-212ENST00000478288 PLXDC1Q8IUK5 500 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 TRIM4Q9C037 500 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 GPN2Q9H9Y4 310 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-212ENST00000478288 RAD18Q9NS91 495 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 SIDT1Q9NXL6 827 aaKnown RBP12.84□□□□□ -0.35
ABCF3-212ENST00000478288 DTLQ9NZJ0 730 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 CPNE7Q9UBL6 633 aa12.84□□□□□ -0.35
ABCF3-212ENST00000478288 LUC7L2Q9Y383 392 aaKnown RBP12.84□□□□□ -0.35
ABCF3-212ENST00000478288 CHUKO15111 745 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 DLGAP3O95886 979 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 C9P02748 559 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 HNRNPH3P31942 346 aaKnown RBP12.83□□□□□ -0.36
ABCF3-212ENST00000478288 CD86P42081 329 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 FANCCQ00597 558 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 MC1RQ01726 317 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 CDC20Q12834 499 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 SLC10A2Q12908 348 aaPredicted RBP12.83□□□□□ -0.36
ABCF3-212ENST00000478288 NFATC2Q13469 925 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 ATP13A4Q4VNC1 1196 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 ZNF569Q5MCW4 686 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 TRAM1L1Q8N609 369 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 NCSTNQ92542 709 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 TRIB3Q96RU7 358 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 ZFYVE1Q9HBF4 777 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 TRIM39Q9HCM9 518 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 ATXN10Q9UBB4 475 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 KCNK6Q9Y257 313 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 PRKAB1Q9Y478 270 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 NBPF19A0A087WUL8 3843 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 SEC16AO15027 2179 aa12.83□□□□□ -0.36
ABCF3-212ENST00000478288 TRBV23OR9-2A0A075B6M9 112 aa12.82□□□□□ -0.36
ABCF3-212ENST00000478288 PRR19A6NJB7 356 aa12.82□□□□□ -0.36
ABCF3-212ENST00000478288 POLR1CO15160 346 aaPredicted RBP12.82□□□□□ -0.36
ABCF3-212ENST00000478288 STK17BO94768 372 aa12.82□□□□□ -0.36
ABCF3-212ENST00000478288 MTA2O94776 668 aa12.82□□□□□ -0.36
ABCF3-212ENST00000478288 JCHAINP01591 159 aa12.82□□□□□ -0.36
ABCF3-212ENST00000478288 GYPCP04921 128 aa12.82□□□□□ -0.36
ABCF3-212ENST00000478288 H2AFZP0C0S5 128 aa12.82□□□□□ -0.36
ABCF3-212ENST00000478288 ZNF8P17098 575 aaPredicted RBP12.82□□□□□ -0.36
ABCF3-212ENST00000478288 XRCC1P18887 633 aaPredicted RBP12.82□□□□□ -0.36
ABCF3-212ENST00000478288 STAT5AP42229 794 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms