RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CCNG2Q16589 344 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 LONRF2Q1L5Z9 754 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 KHDC1Q4VXA5 237 aaKnown RBP15.43■□□□□ 0.06
HMGA1-206ENST00000478214 C14orf28Q4W4Y0 310 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 CDCP2Q5VXM1 449 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 FAM151BQ6UXP7 276 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 CHST15Q7LFX5 561 aaPredicted RBP15.43■□□□□ 0.06
HMGA1-206ENST00000478214 ADGRG6Q86SQ4 1221 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 PHYKPLQ8IUZ5 450 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 SLC35F6Q8N357 371 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 GLIS1Q8NBF1 620 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 OR4K2Q8NGD2 314 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 BRSK1Q8TDC3 778 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 MAIP1Q8WWC4 291 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 CCDC74AQ96AQ1 378 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 LRRC45Q96CN5 670 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 CCDC3Q9BQI4 270 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 LRRC40Q9H9A6 602 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 UGT1A7Q9HAW7 530 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 UGT1A10Q9HAW8 530 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 UGT1A8Q9HAW9 530 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 TRIM39Q9HCM9 518 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 PLXNB3Q9ULL4 1909 aa15.43■□□□□ 0.06
HMGA1-206ENST00000478214 GLYATL1P3A0A0U1RQE8 302 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 TRABD2BA6NFA1 517 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 C2orf81A6NN90 581 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 GRID2O43424 1007 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 NUAK1O60285 661 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 PPFIA2O75334 1257 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 PROS1P07225 676 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 CA5AP35218 305 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 MAZP56270 477 aaKnown RBP15.42■□□□□ 0.06
HMGA1-206ENST00000478214 LRP8Q14114 963 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 HLTFQ14527 1009 aaKnown RBP eCLIP15.42■□□□□ 0.06
HMGA1-206ENST00000478214 CERCAMQ5T4B2 595 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 ZDHHC20Q5W0Z9 365 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 DCBLD1Q8N8Z6 715 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 ZDHHC1Q8WTX9 485 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 PATE1Q8WXA2 126 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 VPS35Q96QK1 796 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 RMI1Q9H9A7 625 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 ETNK1Q9HBU6 452 aa15.42■□□□□ 0.06
HMGA1-206ENST00000478214 PIH1D1Q9NWS0 290 aaKnown RBP15.42■□□□□ 0.06
HMGA1-206ENST00000478214 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.42■□□□□ 0.062e-27■■■□□ 15
HMGA1-206ENST00000478214 FEZ2Q9UHY8 353 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-206ENST00000478214 PSMD3O43242 534 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 CRTAMO95727 393 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 ZSCAN5DPP0CG00 497 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 ACP5P13686 325 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 TPH1P17752 444 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 KCNJ1P48048 391 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 DRICH1Q6PGQ1 229 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-206ENST00000478214 C17orf82Q86X59 251 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-206ENST00000478214 CACTIN-AS1Q8N1I8 211 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 CCDC89Q8N998 374 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 OR6C4Q8NGE1 309 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 OR13C4Q8NGS5 318 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 GDAP1Q8TB36 358 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 DTX3LQ8TDB6 740 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 MS4A14Q96JA4 679 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 RAB6BQ9NRW1 208 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 LRIT1Q9P2V4 623 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 FKBPLQ9UIM3 349 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 KCNK6Q9Y257 313 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 DRG1Q9Y295 367 aaKnown RBP15.41■□□□□ 0.06
HMGA1-206ENST00000478214 ZKSCAN5Q9Y2L8 839 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 RNF215Q9Y6U7 377 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 WDFY3Q8IZQ1 3526 aa15.41■□□□□ 0.06
HMGA1-206ENST00000478214 FREM2Q5SZK8 3169 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 USP27XA6NNY8 438 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 CHUKO15111 745 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 LDB2O43679 373 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 VEGFDO43915 354 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 KIF5CO60282 957 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 CDK14O94921 469 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 ECEL1O95672 775 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 EML2O95834 649 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 GLB1P16278 677 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 RPL22P35268 128 aaKnown RBP15.4■□□□□ 0.06
HMGA1-206ENST00000478214 ACTN2P35609 894 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 FDFT1P37268 417 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 ZNF140P52738 457 aaPredicted RBP15.4■□□□□ 0.06
HMGA1-206ENST00000478214 TMPRSS15P98073 1019 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 POU6F1Q14863 301 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 KCTD19Q17RG1 926 aaPredicted RBP15.4■□□□□ 0.06
HMGA1-206ENST00000478214 GPRC6AQ5T6X5 926 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 CRTC3Q6UUV7 619 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 NAGSQ8N159 534 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 RASGEF1CQ8N431 466 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 ARL14Q8N4G2 192 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 PRELID2Q8N945 189 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 Q8N9G6 341 aaPredicted RBP15.4■□□□□ 0.06
HMGA1-206ENST00000478214 PBKQ96KB5 322 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 DEPDC7Q96QD5 511 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 SYNDIG1Q9H7V2 258 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 PAK5Q9P286 719 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 SLC23A2Q9UGH3 650 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 PYCARDQ9ULZ3 195 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 PCDHB1Q9Y5F3 818 aa15.4■□□□□ 0.06
HMGA1-206ENST00000478214 RP1P56715 2156 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms