RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ATG14Q6ZNE5 492 aa16.53■□□□□ 0.24
TRIM13-208ENST00000478111 TIPARPQ7Z3E1 657 aaKnown RBP16.53■□□□□ 0.24
TRIM13-208ENST00000478111 LUZP1Q86V48 1076 aa16.53■□□□□ 0.24
TRIM13-208ENST00000478111 CCDC13Q8IYE1 715 aa16.53■□□□□ 0.24
TRIM13-208ENST00000478111 CTRCQ99895 268 aa16.53■□□□□ 0.24
TRIM13-208ENST00000478111 MLPHQ9BV36 600 aaPredicted RBP16.53■□□□□ 0.24
TRIM13-208ENST00000478111 RMI1Q9H9A7 625 aa16.53■□□□□ 0.24
TRIM13-208ENST00000478111 FBXO8Q9NRD0 319 aa16.53■□□□□ 0.24
TRIM13-208ENST00000478111 ATXN10Q9UBB4 475 aa16.53■□□□□ 0.24
TRIM13-208ENST00000478111 KCNK1O00180 336 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 ACP5P13686 325 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 F3P13726 295 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 MX2P20592 715 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 UBASH3AP57075 661 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 ZBTB17Q13105 803 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 LYSMD3Q7Z3D4 306 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 MAP7D3Q8IWC1 876 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 PLD5Q8N7P1 536 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 NCSTNQ92542 709 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 RAPGEF5Q92565 580 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 TEFMQ96QE5 360 aaKnown RBP16.52■□□□□ 0.24
TRIM13-208ENST00000478111 TRIB3Q96RU7 358 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 HERPUD2Q9BSE4 406 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 TBC1D10AQ9BXI6 508 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 PACSIN1Q9BY11 444 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 CARD9Q9H257 536 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 ADNPQ9H2P0 1102 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 APMAPQ9HDC9 416 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 ARFGAP3Q9NP61 516 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 PKD2L2Q9NZM6 624 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 CTTNBP2NLQ9P2B4 639 aa16.52■□□□□ 0.24
TRIM13-208ENST00000478111 LUC7L2Q9Y383 392 aaKnown RBP16.52■□□□□ 0.24
TRIM13-208ENST00000478111 LOC101059948A0A1B0GTJ6 334 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 NKX2-8O15522 239 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 ARHGAP6O43182 974 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 GRID2O43424 1007 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 SNX2O60749 519 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 KRT7P08729 469 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 ZNF8P17098 575 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-208ENST00000478111 KDELR1P24390 212 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 CLCNKAP51800 687 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 EPHA4P54764 986 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 UBE2IP63279 158 aaKnown RBP16.51■□□□□ 0.23
TRIM13-208ENST00000478111 IFI35P80217 286 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-208ENST00000478111 PPIDQ08752 370 aaKnown RBP16.51■□□□□ 0.23
TRIM13-208ENST00000478111 ZNF648Q5T619 568 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-208ENST00000478111 SLC9B2Q86UD5 537 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 CCNYQ8ND76 341 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 GPR26Q8NDV2 337 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 SH3KBP1Q96B97 665 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 SLC45A3Q96JT2 553 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 RNF157Q96PX1 679 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 PRDM8Q9NQV8 689 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 HAUS2Q9NVX0 235 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 SCHIP1Q9P0W5 487 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-208ENST00000478111 UVRAGQ9P2Y5 699 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 CPNE7Q9UBL6 633 aa16.51■□□□□ 0.23
TRIM13-208ENST00000478111 TMEM184BQ9Y519 407 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-208ENST00000478111 UTP20O75691 2785 aaKnown RBP16.51■□□□□ 0.23
TRIM13-208ENST00000478111 KIR2DS5A0A0G2JLQ3 304 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 A0A0G2JNG1 304 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 KIR2DS3K7RE56 304 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 HNRNPH3P31942 346 aaKnown RBP16.5■□□□□ 0.23
TRIM13-208ENST00000478111 CASP14P31944 242 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 POLE2P56282 527 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 KCNAB2Q13303 367 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 GALNT3Q14435 633 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 KIR2DS5Q14953 304 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 CEACAM20Q6UY09 585 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 NLGN4XQ8N0W4 816 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 NLGN4YQ8NFZ3 816 aaPredicted RBP16.5■□□□□ 0.23
TRIM13-208ENST00000478111 CCHCR1Q8TD31 782 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 IQCDQ96DY2 449 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 PLEKHG4BQ96PX9 1271 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 ZMYND15Q9H091 742 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 OR2AG1Q9H205 316 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 SIDT1Q9NXL6 827 aaKnown RBP16.5■□□□□ 0.23
TRIM13-208ENST00000478111 OGFRQ9NZT2 677 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 SLC23A2Q9UGH3 650 aa16.5■□□□□ 0.23
TRIM13-208ENST00000478111 PRRC2CQ9Y520 2896 aaKnown RBP16.5■□□□□ 0.23
TRIM13-208ENST00000478111 MN1Q10571 1320 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-208ENST00000478111 PRR19A6NJB7 356 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 C3orf70A6NLC5 250 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-208ENST00000478111 OR5K4A6NMS3 321 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 ZNF891A8MT65 544 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-208ENST00000478111 CHUKO15111 745 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 CAPN5O15484 640 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-208ENST00000478111 DLGAP3O95886 979 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 H2AFZP0C0S5 128 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 MAP4P27816 1152 aaKnown RBP16.49■□□□□ 0.23
TRIM13-208ENST00000478111 MAN1A1P33908 653 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 PPM1FP49593 454 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-208ENST00000478111 ASTE1Q2TB18 679 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-208ENST00000478111 H2AFVQ71UI9 128 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 TMC3Q7Z5M5 1100 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 ADGRG6Q86SQ4 1221 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 PTRH1Q86Y79 214 aaKnown RBP16.49■□□□□ 0.23
TRIM13-208ENST00000478111 UNC5BQ8IZJ1 945 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 TADA1Q96BN2 335 aa16.49■□□□□ 0.23
TRIM13-208ENST00000478111 IMP4Q96G21 291 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms