RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 ACTL9Q8TC94 416 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 TMEM159Q96B96 161 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 CCDC97Q96F63 343 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-222ENST00000477937 NAF1Q96HR8 494 aaKnown RBP13.67□□□□□ -0.22
HDAC7-222ENST00000477937 MRGPRX2Q96LB1 330 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 PLEKHG4BQ96PX9 1271 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 CARD9Q9H257 536 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 TRABDQ9H4I3 376 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 TRIM39Q9HCM9 518 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 HACD3Q9P035 362 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 AMFRQ9UKV5 643 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 SPO11Q9Y5K1 396 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
HDAC7-222ENST00000477937 LAMA5O15230 3695 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 GRID2IPA4D2P6 1211 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 GOLGA6L6A8MZA4 724 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 GPR89AB7ZAQ6 455 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 F5H423 210 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-222ENST00000477937 AURKAO14965 403 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 PPM1DO15297 605 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 TJP3O95049 919 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 ITGA2BP08514 1039 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 GPR89BP0CG08 455 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 RBP3P10745 1247 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 PYGMP11217 842 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 HLA-DPA1P20036 260 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 UGT1A5P35504 534 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 HMGCLP35914 325 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 EIF3EP60228 445 aaKnown RBP13.66□□□□□ -0.22
HDAC7-222ENST00000477937 TLE3Q04726 772 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 SLC1A5Q15758 541 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 CLPPQ16740 277 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-222ENST00000477937 MAP9Q49MG5 647 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 ITPRIPL1Q6GPH6 555 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 PEX26Q7Z412 305 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 PHYKPLQ8IUZ5 450 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 SPACA3Q8IXA5 215 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 SYCE1Q8N0S2 351 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 SLC25A41Q8N5S1 370 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 UBL4BQ8N7F7 174 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 IPMKQ8NFU5 416 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 KCNE4Q8WWG9 221 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 ALG3Q92685 438 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 GLYATL1Q969I3 302 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 OXNAD1Q96HP4 312 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-222ENST00000477937 HERPUD2Q9BSE4 406 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 FSD1LQ9BXM9 530 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 DPH1Q9BZG8 443 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 OR2AG1Q9H205 316 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 C10orf88Q9H8K7 445 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 RDH14Q9HBH5 336 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 ARFGAP3Q9NP61 516 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC7-222ENST00000477937 ATXN10Q9UBB4 475 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 PCYT1BQ9Y5K3 369 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-222ENST00000477937 ZFHX4Q86UP3 3567 aa13.66□□□□□ -0.22
HDAC7-222ENST00000477937 TRBV23OR9-2A0A075B6M9 112 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 PMS2P1A4D2B8 440 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 MIF4GDA9UHW6 222 aaKnown RBP13.65□□□□□ -0.22
HDAC7-222ENST00000477937 ANXA9O76027 345 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 STK10O94804 968 aaKnown RBP13.65□□□□□ -0.22
HDAC7-222ENST00000477937 PTMAP06454 111 aaKnown RBP13.65□□□□□ -0.22
HDAC7-222ENST00000477937 JMJD7P0C870 316 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 ACP5P13686 325 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 SLC2A4P14672 509 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 ZNF8P17098 575 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-222ENST00000477937 CHRNA4P43681 627 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 FASLGP48023 281 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 GEMP55040 296 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 PHF19Q5T6S3 580 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 ZDHHC20Q5W0Z9 365 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 DARS2Q6PI48 645 aaKnown RBP13.65□□□□□ -0.22
HDAC7-222ENST00000477937 USP53Q70EK8 1073 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 GLT6D1Q7Z4J2 308 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 CLEC14AQ86T13 490 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 CDKL3Q8IVW4 592 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-222ENST00000477937 SFRP1Q8N474 314 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 CRELD1Q96HD1 420 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 CMKLR1Q99788 373 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 GBA3Q9H227 469 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 BPIFA1Q9NP55 256 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 KCNK4Q9NYG8 393 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 KCNK6Q9Y257 313 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 NBEAQ8NFP9 2946 aa13.65□□□□□ -0.22
HDAC7-222ENST00000477937 GOLGA6L9A6NEM1 432 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 KMOO15229 486 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 KCNN4O15554 427 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 KLK10O43240 276 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 VEGFDO43915 354 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 ZNF189O75820 626 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-222ENST00000477937 CDK14O94921 469 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 CD1CP29017 333 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 UCNP55089 124 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 GPLD1P80108 840 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 SQSTM1Q13501 440 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 PRPSAP1Q14558 356 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 ANKRD20A2Q5SQ80 823 aa13.64□□□□□ -0.23
HDAC7-222ENST00000477937 ZNF648Q5T619 568 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-222ENST00000477937 ANKRD20A1Q5TYW2 823 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms