RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 BPIP17213 487 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 PTPN7P35236 360 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 TNNT3P45378 269 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 MAZP56270 477 aaKnown RBP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 ILF3Q12906 894 aaKnown RBP eCLIP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 OLIG2Q13516 323 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 ISXQ2M1V0 245 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 C14orf28Q4W4Y0 310 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 GLE1Q53GS7 698 aaKnown RBP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 HENMT1Q5T8I9 393 aaKnown RBP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 FOXR1Q6PIV2 292 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 OGFOD3Q6PK18 319 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 C19orf48Q6RUI8 117 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 CHST15Q7LFX5 561 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 TMC3Q7Z5M5 1100 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 GALNT13Q8IUC8 556 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 CDKL3Q8IVW4 592 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 MMGT1Q8N4V1 131 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 GPR156Q8NFN8 814 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 CCDC110Q8TBZ0 833 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 BLOC1S5Q8TDH9 187 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 ZDHHC1Q8WTX9 485 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 NXPE2Q96DL1 559 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 ATXN7L3BQ96GX2 97 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 DCBLD2Q96PD2 775 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 OR2M4Q96R27 311 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 FCRL5Q96RD9 977 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 VAT1Q99536 393 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 APOL2Q9BQE5 337 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 GSDMCQ9BYG8 508 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 TRNAU1APQ9NX07 287 aaKnown RBP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 TAAR2Q9P1P5 351 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 LRIT1Q9P2V4 623 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 RALYQ9UKM9 306 aaKnown RBP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 TRHDEQ9UKU6 1024 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 EFR3BQ9Y2G0 817 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 RNF215Q9Y6U7 377 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 LAMA5O15230 3695 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 CELSR3Q9NYQ7 3312 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 A0A1W2PQM1 296 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 PMS2P1A4D2B8 440 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 RGSL1A5PLK6 1076 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 BRINP1O60477 761 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 DNAJC6O75061 913 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 MTX2O75431 263 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 SLC25A14O95258 325 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ECEL1O95672 775 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 RPLP0P05388 317 aaKnown RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 GLB1P16278 677 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 MCM3P25205 808 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 PSMB4P28070 264 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ACTR1BP42025 376 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ACTR1AP61163 376 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 GABREP78334 506 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 C2orf54Q08AI8 447 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 MPP3Q13368 585 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 SPIDRQ14159 915 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 SPARCL1Q14515 664 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 HLTFQ14527 1009 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 PTPRCAPQ14761 206 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 RTP5Q14D33 572 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 SLC1A5Q15758 541 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 SLC14A2Q15849 920 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 PYCR3Q53H96 274 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 C3orf38Q5JPI3 329 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ANKRD20A2Q5SQ80 823 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 CERCAMQ5T4B2 595 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ANKRD20A1Q5TYW2 823 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ANKRD20A3Q5VUR7 823 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 RBM44Q6ZP01 1051 aaKnown RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 SLC13A5Q86YT5 568 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 CACTIN-AS1Q8N1I8 211 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ARL14Q8N4G2 192 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 TAB3Q8N5C8 712 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 LRRN4CLQ8ND94 238 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 HNRNPLLQ8WVV9 542 aaKnown RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 SCARF2Q96GP6 870 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 GFM1Q96RP9 751 aaKnown RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 GORASP1Q9BQQ3 440 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 FICDQ9BVA6 458 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 FOXP3Q9BZS1 431 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 NRSN2Q9GZP1 204 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 CDH19Q9H159 772 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 OR2AG1Q9H205 316 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 GBA3Q9H227 469 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 LRRN3Q9H3W5 708 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 HOMER3Q9NSC5 361 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ATXN10Q9UBB4 475 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ATXN7L1Q9ULK2 861 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 R3HDM2Q9Y2K5 976 aaKnown RBP8.2□□□□□ -1.1
HDAC6-221ENST00000477561 ENTPD2Q9Y5L3 495 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 MYLKQ15746 1914 aa8.2□□□□□ -1.1
HDAC6-221ENST00000477561 A0A1W2PNU3 283 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-221ENST00000477561 RHPN2P1A8MT19 583 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 NTN3O00634 580 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-221ENST00000477561 B4GAT1O43505 415 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 TLX3O43711 291 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-221ENST00000477561 UGT1A9O60656 530 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 SNX2O60749 519 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 STK10O94804 968 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms