RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 PLEKHG4BQ96PX9 1271 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 OR6C1Q96RD1 312 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 CNPY3Q9BT09 278 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 RIOK2Q9BVS4 552 aaKnown RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 TWSG1Q9GZX9 223 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 SP110Q9HB58 689 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 SARS2Q9NP81 518 aaKnown RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 CWC15Q9P013 229 aaKnown RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 SLC23A2Q9UGH3 650 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 PCSK1NQ9UHG2 260 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 ZNHIT2Q9UHR6 403 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 ERRFI1Q9UJM3 462 aaPredicted RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 VPS4AQ9UN37 437 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 PIPSLA2A3N6 862 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 WIPF3A6NGB9 483 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 PES1O00541 588 aaKnown RBP9.65□□□□□ -0.86
COL4A5-204ENST00000477429 KRT86O43790 486 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 FZD6O60353 706 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 MAFKO60675 156 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 CREG1O75629 220 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 C9P02748 559 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 ACP5P13686 325 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 PRF1P14222 555 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 NSFP46459 744 aaKnown RBP9.65□□□□□ -0.86
COL4A5-204ENST00000477429 MC1RQ01726 317 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 SEMA5AQ13591 1074 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 DNASE1L3Q13609 305 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 DPYSQ14117 519 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 INPP5JQ15735 1006 aaPredicted RBP9.65□□□□□ -0.86
COL4A5-204ENST00000477429 TMCO4Q5TGY1 634 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 LCN10Q6JVE6 187 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 DNAJC24Q6P3W2 148 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 GALNT13Q8IUC8 556 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 APLFQ8IW19 511 aaPredicted RBP9.65□□□□□ -0.86
COL4A5-204ENST00000477429 FAM114A1Q8IWE2 563 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 AP2M1Q96CW1 435 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 NUDCD1Q96RS6 583 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 MGME1Q9BQP7 344 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 ZPBPQ9BS86 351 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 EFHD1Q9BUP0 239 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 ACTL8Q9H568 366 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 MLXIPLQ9NP71 852 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 ZNF624Q9P2J8 865 aaPredicted RBP9.65□□□□□ -0.86
COL4A5-204ENST00000477429 POLHQ9Y253 713 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 SIK3Q9Y2K2 1263 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 PPIL1Q9Y3C6 166 aa9.65□□□□□ -0.86
COL4A5-204ENST00000477429 GOLGA6L3A6NEY3 463 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 PSMD11O00231 422 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 ZW10O43264 779 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 SOCS5O75159 536 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 SPAG6O75602 509 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 NDUFA10O95299 355 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 CLDN7O95471 211 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 LDLRP01130 860 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 PRLP01236 227 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 ANKRD34CP0C6C1 535 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 BRAFP15056 766 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 AMPD1P23109 780 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 IL1R2P27930 398 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 SLC19A1P41440 591 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 STC1P52823 247 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 RFTN1Q14699 578 aaPredicted RBP9.64□□□□□ -0.87
COL4A5-204ENST00000477429 KCNAB1Q14722 419 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 PPP6R3Q5H9R7 873 aaPredicted RBP9.64□□□□□ -0.87
COL4A5-204ENST00000477429 TXNRD3NBQ6F5E7 133 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 MCOLN2Q8IZK6 566 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL4A5-204ENST00000477429 RSC1A1Q92681 617 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 EID2BQ96D98 161 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 TGM7Q96PF1 710 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 RANBP9Q96S59 729 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 TRIT1Q9H3H1 467 aaKnown RBP9.64□□□□□ -0.87
COL4A5-204ENST00000477429 CPNE7Q9UBL6 633 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 PHTF1Q9UMS5 762 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 PCDHGA6Q9Y5G7 932 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 ADGRG1Q9Y653 693 aa9.64□□□□□ -0.87
COL4A5-204ENST00000477429 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.63□□□□□ -0.87
COL4A5-204ENST00000477429 ASMTLO95671 621 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 CALB1P05937 261 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 CYP2A6P11509 494 aaPredicted RBP9.63□□□□□ -0.87
COL4A5-204ENST00000477429 FOLR1P15328 257 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 MIPP30301 263 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 CCL11P51671 97 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 EPHA4P54764 986 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 MAMLD1Q13495 774 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 TPD52L1Q16890 204 aaPredicted RBP9.63□□□□□ -0.87
COL4A5-204ENST00000477429 TCP11X2Q5H9J9 407 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 PRAMEF17Q5VTA0 474 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 PWWP2BQ6NUJ5 590 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 TRIM72Q6ZMU5 477 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 MAMDC2Q7Z304 686 aaPredicted RBP9.63□□□□□ -0.87
COL4A5-204ENST00000477429 RBMXL3Q8N7X1 1067 aaKnown RBP9.63□□□□□ -0.87
COL4A5-204ENST00000477429 MLKLQ8NB16 471 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 TTC13Q8NBP0 860 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 SYT11Q9BT88 431 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 LHX9Q9NQ69 397 aa9.63□□□□□ -0.87
COL4A5-204ENST00000477429 PLSCR2Q9NRY7 297 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms