RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 GOT2P00505 430 aaKnown RBP4.96□□□□□ -1.61
CCDC39-204ENST00000476379 CKBP12277 381 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 DARSP14868 501 aaKnown RBP4.96□□□□□ -1.61
CCDC39-204ENST00000476379 FMO3P31513 532 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 ABCD1P33897 745 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF132P52740 706 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 GEMP55040 296 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 RHOAP61586 193 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 CHRNB3Q05901 458 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 SLC18A2Q05940 514 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 PTGR1Q14914 329 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 NR1D2Q14995 579 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 PCID2Q5JVF3 399 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF534Q76KX8 674 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 ZC3HC1Q86WB0 502 aaKnown RBP4.96□□□□□ -1.61
CCDC39-204ENST00000476379 PLD3Q8IV08 490 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 CACTIN-AS1Q8N1I8 211 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 CNTD1Q8N815 330 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 ITFG1Q8TB96 612 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 ARNTL2Q8WYA1 636 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 YME1L1Q96TA2 773 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 RHOJQ9H4E5 214 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 AKTIPQ9H8T0 292 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 FANCEQ9HB96 536 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 GLOD4Q9HC38 313 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 TNFRSF12AQ9NP84 129 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 DMAP1Q9NPF5 467 aaPredicted RBP4.96□□□□□ -1.61
CCDC39-204ENST00000476379 TBC1D23Q9NUY8 699 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 TMEM30AQ9NV96 361 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 INTS7Q9NVH2 962 aaKnown RBP4.96□□□□□ -1.61
CCDC39-204ENST00000476379 SIRPGQ9P1W8 387 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 FKBPLQ9UIM3 349 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 PCDHB12Q9Y5F1 795 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 SLC35F4A4IF30 521 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 ARL5CA6NH57 179 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 PSMD11O00231 422 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 CLASP2O75122 1294 aaKnown RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 IPO13O94829 963 aaKnown RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 ODC1P11926 461 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 ATP5F1P24539 256 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 NR2C2P49116 596 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 PCYT1AP49585 367 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 C21orf59P57076 290 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 FAM214AQ32MH5 1076 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 PAGE2BQ5JRK9 111 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 DDI2Q5TDH0 399 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 MRNIPQ6NTE8 343 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 PKN3Q6P5Z2 889 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 CHRDL2Q6WN34 429 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 PIWIL3Q7Z3Z3 882 aaKnown RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 CCDC103Q8IW40 242 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 FAM81AQ8TBF8 368 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 ZFYVE19Q96K21 471 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 CIPCQ9C0C6 399 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 ATP8B3O60423 1300 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 PRRC2CQ9Y520 2896 aaKnown RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 GNG14A0A1W2PPG7 69 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 TRIM43BA6NCK2 446 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 OR2AG2A6NM03 316 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 SOCS2O14508 198 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 MAGEC1O60732 1142 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 APOL3O95236 402 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 F2P00734 622 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 LDLRP01130 860 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 RHOCP08134 193 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 SERPINF2P08697 491 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 MBL2P11226 248 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 ALOX12P18054 663 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 OXTRP30559 389 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 CD68P34810 354 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 TRPC1P48995 793 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 CCNG1P51959 295 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 DAOAP59103 153 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 MRPS15P82914 257 aaKnown RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 MSLNQ13421 630 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 DPYSL2Q16555 572 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 GTDC1Q4AE62 458 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 RNASE12Q5GAN4 147 aaKnown RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 ACBD5Q5T8D3 534 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 EMC10Q5UCC4 262 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 OR52E8Q6IFG1 317 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 DOK6Q6PKX4 331 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 ARCQ7LC44 396 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 PDSS2Q86YH6 399 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 LILRA2Q8N149 483 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF276Q8N554 614 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 C12orf76Q8N812 135 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 DDHD1Q8NEL9 900 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 MAGEC3Q8TD91 643 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 SGCDQ92629 289 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 TRIM43Q96BQ3 446 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 C3orf30Q96M34 536 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 COPS4Q9BT78 406 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 PPCSQ9HAB8 311 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 PARVBQ9HBI1 364 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 SCUBE2Q9NQ36 999 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 RSL24D1Q9UHA3 163 aaKnown RBP4.96□□□□□ -1.62
CCDC39-204ENST00000476379 KIAA1217Q5T5P2 1943 aa4.96□□□□□ -1.62
CCDC39-204ENST00000476379 CCDC162PA2VCL2 907 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 E9PAM4 449 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms