RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ASB6Q9NWX5 421 aa4.21□□□□□ -1.74
VPS13D-207ENST00000476169 DCAF16Q9NXF7 216 aa4.21□□□□□ -1.74
VPS13D-207ENST00000476169 TAS2R14Q9NYV8 317 aa4.21□□□□□ -1.74
VPS13D-207ENST00000476169 NINJ2Q9NZG7 142 aa4.21□□□□□ -1.74
VPS13D-207ENST00000476169 IPO11Q9UI26 975 aaKnown RBP4.21□□□□□ -1.74
VPS13D-207ENST00000476169 ADAM21Q9UKJ8 722 aa4.21□□□□□ -1.74
VPS13D-207ENST00000476169 ITGA11Q9UKX5 1188 aa4.21□□□□□ -1.74
VPS13D-207ENST00000476169 DUSP12Q9UNI6 340 aa4.21□□□□□ -1.74
VPS13D-207ENST00000476169 STX8Q9UNK0 236 aa4.21□□□□□ -1.74
VPS13D-207ENST00000476169 PIN4Q9Y237 131 aaKnown RBP4.21□□□□□ -1.74
VPS13D-207ENST00000476169 ACEP12821 1306 aa4.21□□□□□ -1.74
VPS13D-207ENST00000476169 EIF4G1Q04637 1599 aaKnown RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 SYNJ2BP-COX16A0A087WUM0 186 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 TMEM191CA6NGB0 347 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 CGB1A6NKQ9 187 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 HSPB2A8KAH6 182 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 FAM157AC9JC47 383 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 CCDC188H7C350 402 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 ATP2A1O14983 1001 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 CLIC2O15247 247 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 VEGFDO43915 354 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 SMPD2O60906 423 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 JRKO75564 520 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 RNF8O76064 485 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 SIX3O95343 332 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 NFATC1O95644 943 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 IFNB1P01574 187 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 GHRP10912 638 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 ITIH1P19827 911 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 GPD1P21695 349 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 GPTP24298 496 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 CHRNA5P30532 468 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 PRCPP42785 496 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 CASP9P55211 416 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 ST8SIA6P61647 398 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 HTD2P86397 168 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 GFPT1Q06210 699 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 RBPJQ06330 500 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 ACSM1Q08AH1 577 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 NAE1Q13564 534 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 PDK1Q15118 436 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 PGM5Q15124 567 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 HSPB2Q16082 182 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 WSCD2Q2TBF2 565 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 USP41Q3LFD5 358 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 DNTTIP2Q5QJE6 756 aaKnown RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 VWA5B1Q5TIE3 1220 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 PLA2G4FQ68DD2 849 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 FBXO46Q6PJ61 603 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 RBM44Q6ZP01 1051 aaKnown RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 ZNF627Q7L945 461 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 LDB1Q86U70 411 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 NOXA1Q86UR1 476 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 MCEMP1Q8IX19 187 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 ZBTB2Q8N680 514 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 PNLDC1Q8NA58 520 aaKnown RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 GJC3Q8NFK1 279 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 IPMKQ8NFU5 416 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 HUS1BQ8NHY5 278 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 CCDC110Q8TBZ0 833 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 HASPINQ8TF76 798 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 TMEM170AQ8WVE7 144 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 NEU4Q8WWR8 484 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 SPACA9Q96E40 222 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 RBM18Q96H35 190 aaKnown RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 TIMP4Q99727 224 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 INPP5KQ9BT40 448 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 ZNF747Q9BV97 191 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 KATNB1Q9BVA0 655 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 TM2D2Q9BX73 214 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 FRMD8Q9BZ67 464 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 DPH5Q9H2P9 285 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 RWDD1Q9H446 243 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 ANKZF1Q9H8Y5 726 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 CGNQ9P2M7 1197 aaKnown RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 COPG2Q9UBF2 871 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 SERGEFQ9UGK8 458 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 TSPYL4Q9UJ04 414 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 LEF1Q9UJU2 399 aaPredicted RBP4.2□□□□□ -1.74
VPS13D-207ENST00000476169 APPL1Q9UKG1 709 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 FBXW2Q9UKT8 454 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 PCDHGA5Q9Y5G8 931 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 PCDHGA1Q9Y5H4 931 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 WNT6Q9Y6F9 365 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 CEPT1Q9Y6K0 416 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 ATP8B3O60423 1300 aa4.2□□□□□ -1.74
VPS13D-207ENST00000476169 FAM86B1E9PN63 330 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 K7EPI3 171 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 INPPL1O15357 1258 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 ST8SIA3O43173 380 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 CRCPO75575 148 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 MOCS3O95396 460 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 PLAUP00749 431 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 FAM86B2P0C5J1 330 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 KRT13P13646 458 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 ETFAP13804 333 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 INSRRP14616 1297 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 WT1P19544 449 aaPredicted RBP4.19□□□□□ -1.74
VPS13D-207ENST00000476169 AZGP1P25311 298 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms