RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 AHCTF1Q8WYP5 2266 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 KIF26BQ2KJY2 2108 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 LRRK1Q38SD2 2015 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 RELNP78509 3460 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 LRP4O75096 1905 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 RGSL1A5PLK6 1076 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 EFCAB7A8K855 629 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 CYSRT1A8MQ03 144 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 A8MU76 341 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF487B1APH4 448 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 GOLGA6L19H0YKK7 550 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 STMND1H3BQB6 276 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 CHUKO15111 745 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 GRID2O43424 1007 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 MTX2O75431 263 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 PYGLP06737 847 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 ACP5P13686 325 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 LIFP15018 202 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 BRAFP15056 766 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 PTPN3P26045 913 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 CD82P27701 267 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 ARHGAP25P42331 645 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 TPM4P67936 248 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 GPLD1P80108 840 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 NFKB2Q00653 900 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 HHEXQ03014 270 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 CDK18Q07002 472 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 AP1B1Q10567 949 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 WASHC5Q12768 1159 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 NFATC2Q13469 925 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 TRA2AQ13595 282 aaKnown RBP eCLIP6.94□□□□□ -1.3
HDAC3-207ENST00000475549 NOMO1Q15155 1222 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 TCEAL1Q15170 157 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 LLGL1Q15334 1064 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 TAZQ16635 292 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 SNAP47Q5SQN1 464 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 MANEAQ5SRI9 462 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 ALS2CLQ60I27 953 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 WDR74Q6RFH5 385 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-207ENST00000475549 MFSD7Q6UXD7 560 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 TIPARPQ7Z3E1 657 aaKnown RBP6.94□□□□□ -1.3
HDAC3-207ENST00000475549 C11orf96Q7Z7L8 435 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 ADGRG6Q86SQ4 1221 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 VSIG1Q86XK7 387 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 VSTM4Q8IW00 320 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 AGBL5Q8NDL9 886 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 AGAP3Q96P47 875 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 PLEKHG4BQ96PX9 1271 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 SLC38A3Q99624 504 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 TBC1D10AQ9BXI6 508 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 ADGRE3Q9BY15 652 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 SLC25A51Q9H1U9 297 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 OR2AG1Q9H205 316 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 MAGEE1Q9HCI5 957 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 TRIM39Q9HCM9 518 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 APMAPQ9HDC9 416 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 SARS2Q9NP81 518 aaKnown RBP6.94□□□□□ -1.3
HDAC3-207ENST00000475549 STARD5Q9NSY2 213 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 ABHD10Q9NUJ1 306 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 SLC39A1Q9NY26 324 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 SEPT10Q9P0V9 454 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF624Q9P2J8 865 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-207ENST00000475549 METRNQ9UJH8 293 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 PILRAQ9UKJ1 303 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 SLC30A1Q9Y6M5 507 aa6.94□□□□□ -1.3
HDAC3-207ENST00000475549 COL12A1Q99715 3063 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 LOC285095A0A1B0GVY8 99 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 B4E171 279 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 APOL1O14791 398 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 NKX2-8O15522 239 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 AKR1B10O60218 316 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 SNX2O60749 519 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 SLC25A14O95258 325 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-207ENST00000475549 F3P13726 295 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 PECAM1P16284 738 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-207ENST00000475549 BPIP17213 487 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 COMTP21964 271 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 CSTF2P33240 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
HDAC3-207ENST00000475549 SLC19A1P41440 591 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 TSPAN7P41732 249 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 CDKN2BP42772 138 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 CLCNKAP51800 687 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 DYNLT1P63172 113 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 UBE2IP63279 158 aaKnown RBP6.93□□□□□ -1.3
HDAC3-207ENST00000475549 MC2RQ01718 297 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 NFATC3Q12968 1075 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 TBX2Q13207 712 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-207ENST00000475549 BIRC2Q13490 618 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 PEX6Q13608 980 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 PRKD1Q15139 912 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-207ENST00000475549 PCSK7Q16549 785 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 TEX44Q53QW1 395 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 ZFYVE27Q5T4F4 411 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 TMEM164Q5U3C3 297 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 LRRC38Q5VT99 294 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 NT5DC3Q86UY8 548 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 UNC5BQ8IZJ1 945 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 TRAM1L1Q8N609 369 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 EFCAB3Q8N7B9 438 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 OR10G6Q8NH81 332 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms