RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SATB1Q01826 763 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ZBTB16Q05516 673 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 DPTQ07507 201 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ELP6Q0PNE2 266 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TDGQ13569 410 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 CCINQ13939 588 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 CHRNA6Q15825 494 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TSNAXIP1Q2TAA8 658 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 CCDC153Q494R4 210 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 RBM20Q5T481 1227 aaKnown RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PIP5KL1Q5T9C9 394 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 HECTD2Q5U5R9 776 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ERAP2Q6P179 960 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 LVRNQ6Q4G3 990 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TMEM207Q6UWW9 146 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 MACC1Q6ZN28 852 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 MICALCLQ6ZW33 695 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ERN2Q76MJ5 926 aaKnown RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TRMT11Q7Z4G4 463 aaKnown RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 HSD11B1LQ7Z5J1 315 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 CMC1Q7Z7K0 106 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TTC7BQ86TV6 843 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 LDB1Q86U70 411 aaPredicted RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 SLC41A1Q8IVJ1 513 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 CENPLQ8N0S6 344 aaPredicted RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 GJD3Q8N144 294 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PLD6Q8N2A8 252 aaKnown RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 NXPE1Q8N323 547 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TRAM1L1Q8N609 369 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF366Q8N895 744 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF513Q8N8E2 541 aaPredicted RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 IL17RCQ8NAC3 791 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 OR2T3Q8NH03 318 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 RDH11Q8TC12 318 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF398Q8TD17 642 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 KCNJ9Q92806 393 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TSPAN17Q96FV3 270 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PPP1R16AQ96I34 528 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 VPS35Q96QK1 796 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 CAB39LQ9H9S4 337 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 BPIFA1Q9NP55 256 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PCMTD2Q9NV79 361 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 KCTD5Q9NXV2 234 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 CACNA2D2Q9NY47 1150 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PKD2L2Q9NZM6 624 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TMEM216Q9P0N5 145 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 SLC17A7Q9P2U7 560 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TMPRSS11EQ9UL52 423 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 SLC39A10Q9ULF5 831 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 SCML1Q9UN30 329 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 DUSP12Q9UNI6 340 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ACOT9Q9Y305 439 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PCDHB1Q9Y5F3 818 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 FADS3Q9Y5Q0 445 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 OAS3Q9Y6K5 1087 aaKnown RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 SLC30A1Q9Y6M5 507 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PIAS3Q9Y6X2 628 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 F5P12259 2224 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 CHURC1-FNTBB4DL54 471 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 H3BMM5 538 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 KPNA3O00505 521 aaPredicted RBP6.56□□□□□ -1.36
ATG4A-207ENST00000474825 MAN2B1O00754 1011 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 PRMT5O14744 637 aaPredicted RBP6.56□□□□□ -1.36
ATG4A-207ENST00000474825 NARSO43776 548 aaKnown RBP6.56□□□□□ -1.36
ATG4A-207ENST00000474825 BNIP3LO60238 219 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 NDUFS3O75489 264 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 KLHL2O95198 593 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 PRAMEF1O95521 474 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 FAM107AO95990 144 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 EGFP01133 1207 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 APOA4P06727 396 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 EPHX1P07099 455 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 BPGMP07738 259 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 F7P08709 466 aaPredicted RBP6.56□□□□□ -1.36
ATG4A-207ENST00000474825 IL9P15248 144 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF7P17097 686 aaPredicted RBP6.56□□□□□ -1.36
ATG4A-207ENST00000474825 ITGALP20701 1170 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 DRD4P21917 467 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 TEAD1P28347 426 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 PMLP29590 882 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 SKIV2L2P42285 1042 aaKnown RBP6.56□□□□□ -1.36
ATG4A-207ENST00000474825 ABCG1P45844 678 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 SERPINB4P48594 390 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 METAP1P53582 386 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 CDKN2DP55273 166 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 TAS2R38P59533 333 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 RPS14P62263 151 aaKnown RBP6.56□□□□□ -1.36
ATG4A-207ENST00000474825 B4GALNT1Q00973 533 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 PRKCQQ04759 706 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 GRSF1Q12849 480 aaKnown RBP eCLIP6.56□□□□□ -1.36
ATG4A-207ENST00000474825 DLG1Q12959 904 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 ITGA9Q13797 1035 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 ARHGEF7Q14155 803 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 GBX1Q14549 363 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 LRRC14Q15048 493 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 SMAD1Q15797 465 aaKnown RBP6.56□□□□□ -1.36
ATG4A-207ENST00000474825 CST6Q15828 149 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 CRY1Q16526 586 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 SLC44A4Q53GD3 710 aa6.56□□□□□ -1.36
ATG4A-207ENST00000474825 TMEM31Q5JXX7 168 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms