RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ALDH3B1P43353 468 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GRIA4P48058 902 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PSEN2P49810 448 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ATP1A2P50993 1020 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PLK1P53350 603 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PNLIPRP1P54315 467 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 EPS8Q12929 822 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CBFBQ13951 182 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GRB7Q14451 532 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GRM7Q14831 915 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 NOMO1Q15155 1222 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 EIF2S3LQ2VIR3 472 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 WDR72Q3MJ13 1102 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 TCP11X2Q5H9J9 407 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 RAP1GAP2Q684P5 730 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 MAMDC4Q6UXC1 1216 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 TMEM108Q6UXF1 575 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SLC13A5Q86YT5 568 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 KLBQ86Z14 1044 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GID4Q8IVV7 300 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LRRC8AQ8IWT6 810 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 AGGF1Q8N302 714 aaeCLIP3.47□□□□□ -1.85
UBR3-208ENST00000474426 GPR137CQ8N3F9 429 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GALNT4Q8N4A0 578 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PYROXD1Q8WU10 500 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 EDARADDQ8WWZ3 215 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 RIN2Q8WYP3 895 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 ZCCHC14Q8WYQ9 949 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 TOP1MTQ969P6 601 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 FBXO17Q96EF6 278 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 RNF31Q96EP0 1072 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 C10orf90Q96M02 699 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 FAM118BQ9BPY3 351 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GPR63Q9BZJ6 419 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 IL1RAPL2Q9NP60 686 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 EMC7Q9NPA0 242 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 DNPEPQ9ULA0 475 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LMTK2Q8IWU2 1503 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 RUSC2Q8N2Y8 1516 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LAMC3Q9Y6N6 1575 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ARHGEF35A5YM69 484 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 WDR64B1ANS9 1081 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CCDC188H7C350 402 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 NOP56O00567 594 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 PSMA7O14818 248 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SUV39H1O43463 412 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 JAK2O60674 1132 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 XYLBO75191 536 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PRKRAO75569 313 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 FUCA1P04066 466 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ITGAVP06756 1048 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 TUBBP07437 444 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ZNF865P0CJ78 1059 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 PEPDP12955 493 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ACADSP16219 412 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 HNF1AP20823 631 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PTAFRP25105 342 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PSMB6P28072 239 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 EPHA8P29322 1005 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 CDC25BP30305 580 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 MSX2P35548 267 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 MEOX2P50222 304 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ETF1P62495 437 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 RPL10AP62906 217 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 GUCY2DQ02846 1103 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SOX4Q06945 474 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 PPIGQ13427 754 aaKnown RBP eCLIP3.47□□□□□ -1.85
UBR3-208ENST00000474426 ZNF268Q14587 947 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 IFI16Q16666 785 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 TPD52L1Q16890 204 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 SPRED3Q2MJR0 410 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ADCK5Q3MIX3 580 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 MFSD14CQ5VZR4 134 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SV2AQ7L0J3 742 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SNX20Q7Z614 316 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ZBTB33Q86T24 672 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ZNF687Q8N1G0 1237 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 TRAM1L1Q8N609 369 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 RDH13Q8NBN7 331 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 NETO2Q8NC67 525 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 STEAP2Q8NFT2 490 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 OR2T3Q8NH03 318 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GIPC3Q8TF64 312 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 RASSF5Q8WWW0 418 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 MUL1Q969V5 352 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 NOL11Q9H8H0 719 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 SLCO1C1Q9NYB5 712 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PKD2L1Q9P0L9 805 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SIX4Q9UIU6 781 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CDC14AQ9UNH5 594 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PRELID3BQ9Y3B1 194 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ASB4Q9Y574 426 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 WDR97A6NE52 1622 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 FGD5Q6ZNL6 1462 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 CHD5Q8TDI0 1954 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 WASHC1A8K0Z3 465 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 WASH3PC4AMC7 463 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 SYT5O00445 386 aa3.46□□□□□ -1.85
UBR3-208ENST00000474426 NR5A2O00482 541 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms