RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 FMO4P31512 558 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 ABCD1P33897 745 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 GALNSP34059 522 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 HOXD13P35453 343 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CBSP35520 551 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 MATR3P43243 847 aaKnown RBP eCLIP2.43□□□□□ -2.02
CALD1-216ENST00000473714 ALDH7A1P49419 539 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 AGTR2P50052 363 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 ZNF81P51508 661 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 FAM3BP58499 235 aaPredicted RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 RPL7AP62424 266 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 GPC5P78333 572 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 PRAMEP78395 509 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 RAE1P78406 368 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 FAM189BP81408 668 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CREB5Q02930 508 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 DEUP1Q05D60 604 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 FHL3Q13643 280 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 BYSLQ13895 437 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 IL13RA2Q14627 380 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 FAM187BQ17R55 369 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 AP5B1Q2VPB7 878 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 GXYLT1Q4G148 440 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 GLE1Q53GS7 698 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 ZNF766Q5HY98 468 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 SNX30Q5VWJ9 437 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 ARMC3Q5W041 872 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 SLC30A6Q6NXT4 461 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 TMEM65Q6PI78 240 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CYP20A1Q6UW02 462 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 C16orf54Q6UWD8 224 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 KIRREL2Q6UWL6 708 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 C16orf89Q6UX73 402 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 KIAA1324Q6UXG2 1013 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 SERPINA13PQ6UXR4 307 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 Q6YL49 198 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 PXKQ7Z7A4 578 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 GPR149Q86SP6 731 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 TMEM200AQ86VY9 491 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 BRSK2Q8IWQ3 736 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 ABCA7Q8IZY2 2146 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 OR4N4Q8N0Y3 316 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 FRMD1Q8N878 549 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.43□□□□□ -2.02
CALD1-216ENST00000473714 LSMEM1Q8N8F7 131 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 ENDOVQ8N8Q3 282 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 FAM133AQ8N9E0 248 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 Q8NA96 180 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CMASQ8NFW8 434 aaPredicted RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 RP9Q8TA86 221 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 GABPB2Q8TAK5 448 aaPredicted RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 GLMPQ8WWB7 406 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 TFAP2BQ92481 460 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 HSPH1Q92598 858 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 SEPT8Q92599 483 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 FAM120BQ96EK7 910 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 SAT2Q96F10 170 aaPredicted RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 CCDC17Q96LX7 622 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 KLHL15Q96M94 604 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 LENG8Q96PV6 779 aaPredicted RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 PRR25Q96S07 402 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 BAG1Q99933 345 aaPredicted RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 AIFM2Q9BRQ8 373 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 HERC2P3Q9BVR0 1158 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 ELOVL1Q9BW60 279 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 IFT27Q9BW83 186 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 DNAJC18Q9H819 358 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 TLR8Q9NR97 1041 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 PDGFCQ9NRA1 345 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 MPP6Q9NZW5 540 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 LRIT1Q9P2V4 623 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 NFKBIL1Q9UBC1 381 aaPredicted RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 PEMTQ9UBM1 199 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 DKK3Q9UBP4 350 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CHORDC1Q9UHD1 332 aaPredicted RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 TSPYL4Q9UJ04 414 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 SH2B3Q9UQQ2 575 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 RCE1Q9Y256 329 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CHST2Q9Y4C5 530 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 SNX8Q9Y5X2 465 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 KCNE2Q9Y6J6 123 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 PIAS3Q9Y6X2 628 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CELSR2Q9HCU4 2923 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 THADAQ6YHU6 1953 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 ZMYM6O95789 1325 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PHLPP2Q6ZVD8 1323 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 MYH1P12882 1939 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 WDR81Q562E7 1941 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PDZD2O15018 2839 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 GOLGA6L10A0A0M3HER8 536 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 FAM237BA0A1B0GVD1 139 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 GXYLT2A0PJZ3 443 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 BCLAF3A2AJT9 711 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 WIPF3A6NGB9 483 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 A8MV72 311 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 HIDE1A8MVS5 230 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 TEX22C9J3V5 150 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 GCOM1H8Y6P7 765 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 M0QZQ0 153 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 DSCR3O14972 297 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms