RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 BAG5Q9UL15 447 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 IPPQ9Y573 584 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ST14Q9Y5Y6 855 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 C1orf232A0A0U1RR37 186 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 LCHNA4D1U4 455 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 M0R3G1 203 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 NFKBIEO00221 500 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 CD3EAPO15446 510 aaKnown RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 PAGE1O75459 146 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 THP07101 528 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ZNF37AP17032 561 aaPredicted RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 OXCT1P55809 520 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 CSNK2BP67870 215 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 BNIP3Q12983 259 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ZNF618Q5T7W0 954 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 TWF2Q6IBS0 349 aaKnown RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 GALNT18Q6P9A2 607 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ANKRD13BQ86YJ7 626 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 HIPK1Q86Z02 1210 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 GPC2Q8N158 579 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 TMEM130Q8N3G9 435 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 SPATA6LQ8N4H0 392 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ATP6V0D2Q8N8Y2 350 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 NETO2Q8NC67 525 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 GLB1L3Q8NCI6 653 aaPredicted RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 CASP10Q92851 521 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 BIRC7Q96CA5 298 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 OTUD5Q96G74 571 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 FBXL20Q96IG2 436 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 AARSD1Q9BTE6 412 aaKnown RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 GORASP2Q9H8Y8 452 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 CRTAC1Q9NQ79 661 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 GPC6Q9Y625 555 aaPredicted RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 ATP6AP2A0A1C7CYW4 349 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ISPDA4D126 451 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 SAGE2PA6NJ88 616 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 G3V2T6 193 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 K7EPI3 171 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 MAGEB3O15480 346 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 UGT2B11O75310 529 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 VPS26AO75436 327 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ATP6AP2O75787 350 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 BEST1O76090 585 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 RECQL5O94762 991 aaPredicted RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 RHOBTB1O94844 696 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 KCNH1O95259 989 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 RPS17P08708 135 aaKnown RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 GNAO1P09471 354 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 IL1RNP18510 177 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 KCNA5P22460 613 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 CES1P23141 567 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 S100A1P23297 94 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 AKT1P31749 480 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 SH3BP2P78314 561 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 BFSP2Q13515 415 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PWP1Q13610 501 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ATP1A4Q13733 1029 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PCSK7Q16549 785 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PFKFB4Q16877 469 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PARP15Q460N3 678 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 FGD3Q5JSP0 725 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 TUBA3EQ6PEY2 450 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 AFTPHQ6ULP2 937 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 CRTC3Q6UUV7 619 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PRR23CQ6ZRP0 262 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ANKRD23Q86SG2 305 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ZFAND4Q86XD8 727 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PHYKPLQ8IUZ5 450 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 UROC1Q96N76 676 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PSD2Q9BQI7 771 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ACSS2Q9NR19 701 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ENPP5Q9UJA9 477 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ERVW-1Q9UQF0 538 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 SLC45A1Q9Y2W3 748 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 TDRKHQ9Y2W6 561 aaKnown RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 OAS3Q9Y6K5 1087 aaKnown RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 SBF1O95248 1867 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 A0A1B0GTW7 788 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 FAM149AA5PLN7 773 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 HCRTO43612 131 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 SMIM10L2AP0DMW4 78 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 SMIM10L2BP0DMW5 78 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 CRHBPP24387 322 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PBX3P40426 434 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 YBEYP58557 167 aaPredicted RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 RPS3AP61247 264 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 IL10RBQ08334 325 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ITGADQ13349 1161 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 CAPRIN1Q14444 709 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 RBBP7Q16576 425 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PLA2G4EQ3MJ16 856 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 GPRIN3Q6ZVF9 776 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 CCDC80Q76M96 950 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 CYP2U1Q7Z449 544 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 STK32CQ86UX6 486 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 IFNEQ86WN2 208 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 RYBPQ8N488 228 aaPredicted RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 OR7A2PQ8NGA2 310 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 OR5K1Q8NHB7 308 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 BRSK1Q8TDC3 778 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms