RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 MMP2P08253 660 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 TMEM253P0C7T8 217 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 XRCC1P18887 633 aaPredicted RBP13.4□□□□□ -0.26
CHD3-209ENST00000473376 KDELR1P24390 212 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 MC1RQ01726 317 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 GBE1Q04446 702 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 ABHD18Q0P651 414 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 SLC10A2Q12908 348 aaPredicted RBP13.4□□□□□ -0.26
CHD3-209ENST00000473376 NFATC3Q12968 1075 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 TRIM14Q14142 442 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 PDK1Q15118 436 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 PTPRRQ15256 657 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 ASTE1Q2TB18 679 aaPredicted RBP13.4□□□□□ -0.26
CHD3-209ENST00000473376 ATP13A4Q4VNC1 1196 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 NKAIN2Q5VXU1 208 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 SLC9A4Q6AI14 798 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 WASH2PQ6VEQ5 465 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 TMC3Q7Z5M5 1100 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 VASH2Q86V25 355 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 PLXDC1Q8IUK5 500 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 PHYKPLQ8IUZ5 450 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 RBM12BQ8IXT5 1001 aaKnown RBP13.4□□□□□ -0.26
CHD3-209ENST00000473376 NLGN4XQ8N0W4 816 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 LPCAT1Q8NF37 534 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 NLGN4YQ8NFZ3 816 aaPredicted RBP13.4□□□□□ -0.26
CHD3-209ENST00000473376 TADA1Q96BN2 335 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 ZFYVE1Q9HBF4 777 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 WASH6PQ9NQA3 447 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 TBC1D29Q9UFV1 150 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 IL17BQ9UHF5 180 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 PLEKHM1Q9Y4G2 1056 aa13.4□□□□□ -0.26
CHD3-209ENST00000473376 MN1Q10571 1320 aaPredicted RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 EFCAB7A8K855 629 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 FADS2P1A8MWK0 482 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 GOLGA6L19H0YKK7 550 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 GRID2O43424 1007 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 VEGFDO43915 354 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 RAD1O60671 282 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 MTA2O94776 668 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 MAP3K6O95382 1288 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 WT1P19544 449 aaPredicted RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 SRSF6Q13247 344 aaKnown RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 ZDHHC20Q5W0Z9 365 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 BZW1Q7L1Q6 419 aaKnown RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 CHST15Q7LFX5 561 aaPredicted RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 TRIM74Q86UV6 250 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 CACNA2D3Q8IZS8 1091 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 TRAM1L1Q8N609 369 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 PLD5Q8N7P1 536 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 CNTD1Q8N815 330 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 CCNYQ8ND76 341 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 OR8K1Q8NGG5 319 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 HTR3CQ8WXA8 447 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 KIAA1143Q96AT1 154 aaPredicted RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 RTP4Q96DX8 246 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 IMP4Q96G21 291 aaKnown RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 TRIB3Q96RU7 358 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 SLC25A51Q9H1U9 297 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 SUDS3Q9H7L9 328 aaPredicted RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHD3-209ENST00000473376 CPNE7Q9UBL6 633 aa13.39□□□□□ -0.27
CHD3-209ENST00000473376 OAS3Q9Y6K5 1087 aaKnown RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 TLN1Q9Y490 2541 aaKnown RBP13.39□□□□□ -0.27
CHD3-209ENST00000473376 PRR19A6NJB7 356 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 PPP1R12AO14974 1030 aaPredicted RBP13.38□□□□□ -0.27
CHD3-209ENST00000473376 KMOO15229 486 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 INPP4BO15327 924 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 RECKO95980 971 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 EPOP01588 193 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 JCHAINP01591 159 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 C9P02748 559 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 FAM87AP0C7U9 286 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 CD86P42081 329 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 SLC1A1P43005 524 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 CCR10P46092 362 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 NR2C2P49116 596 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 TAS2R40P59535 323 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 UBE2IP63279 158 aaKnown RBP13.38□□□□□ -0.27
CHD3-209ENST00000473376 TCEAL1Q15170 157 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 AGAP9Q5VTM2 703 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 CYB5D1Q6P9G0 228 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 MARK2Q7KZI7 788 aaKnown RBP13.38□□□□□ -0.27
CHD3-209ENST00000473376 NT5DC3Q86UY8 548 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 LUZP1Q86V48 1076 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 RHOT2Q8IXI1 618 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 CPLX3Q8WVH0 158 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 RAPGEF5Q92565 580 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 OLFM3Q96PB7 478 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 PLEKHG4BQ96PX9 1271 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 VPS35Q96QK1 796 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 TIMM29Q9BSF4 260 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 ANP32EQ9BTT0 268 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 RAB33BQ9H082 229 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 OCIAD1Q9NX40 245 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 MYO18BQ8IUG5 2567 aa13.38□□□□□ -0.27
CHD3-209ENST00000473376 A0A0U1RQS6 177 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 C3orf70A6NLC5 250 aaPredicted RBP13.37□□□□□ -0.27
CHD3-209ENST00000473376 SLC25A14O95258 325 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms