RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CDH6P55285 790 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 MYL6P60660 151 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 KRR1Q13601 381 aaKnown RBP10.05□□□□□ -0.8
APTX-216ENST00000472896 ST3GAL2Q16842 350 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 GLRA4Q5JXX5 417 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 SPANXN3Q5MJ09 141 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 KIAA0319Q5VV43 1072 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 USP43Q70EL4 1123 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 BPHLQ86WA6 291 aaPredicted RBP10.05□□□□□ -0.8
APTX-216ENST00000472896 EPHX4Q8IUS5 362 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 WDTC1Q8N5D0 677 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 PCDH20Q8N6Y1 951 aaKnown RBP10.05□□□□□ -0.8
APTX-216ENST00000472896 PLD5Q8N7P1 536 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 JOSD2Q8TAC2 188 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 SUN5Q8TC36 379 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 ATL1Q8WXF7 558 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 TRIM63Q969Q1 353 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 CPXM1Q96SM3 734 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 SLC25A23Q9BV35 468 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 RHOBTB2Q9BYZ6 727 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 NMRAL1Q9HBL8 299 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 MRM3Q9HC36 420 aaKnown RBP10.05□□□□□ -0.8
APTX-216ENST00000472896 MARCH5Q9NX47 278 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 CACNA2D2Q9NY47 1150 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 NPAP1Q9NZP6 1156 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 NCDNQ9UBB6 729 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 UGT2A1Q9Y4X1 527 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 PCDHGA11Q9Y5H2 935 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 STYXL1Q9Y6J8 313 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 WDR81Q562E7 1941 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 DNAH14Q0VDD8 3507 aa10.05□□□□□ -0.8
APTX-216ENST00000472896 PRORSD1PA6NEY8 169 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 SYCE1LA8MT33 242 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 BBIP1A8MTZ0 92 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 KCNU1A8MYU2 1149 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 F8W810 466 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 BCAS1O75363 584 aaPredicted RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 STBD1O95210 358 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 PIGNO95427 931 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 PAPLNO95428 1278 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 EFEMP2O95967 443 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 CD1EP15812 388 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 PSMA4P25789 261 aaKnown RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 CD40LGP29965 261 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 GRIK1P39086 918 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 GRM5P41594 1212 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 ATP4BP51164 291 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 PRKCEQ02156 737 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 CSTF1Q05048 431 aaKnown RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 TNK2Q07912 1038 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 BST2Q10589 180 aaKnown RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 MMRN1Q13201 1228 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 PGS1Q32NB8 556 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 CYP4A22Q5TCH4 519 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 SLFN12LQ6IEE8 588 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 TUBA3EQ6PEY2 450 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 CRTC3Q6UUV7 619 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 TAS2R42Q7RTR8 314 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 MRPL10Q7Z7H8 261 aaKnown RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 SLC22A16Q86VW1 577 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 HACE1Q8IYU2 909 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 LSMEM2Q8N112 164 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 PELI3Q8N2H9 469 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 MFSD4AQ8N468 514 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 AFAP1L2Q8N4X5 818 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 CANT1Q8WVQ1 401 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 FKBP10Q96AY3 582 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 FAM167AQ96KS9 214 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 TSNARE1Q96NA8 513 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 SNX18Q96RF0 628 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 CSF3RQ99062 836 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 RBBP8Q99708 897 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 LHPPQ9H008 270 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 SNX25Q9H3E2 840 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 LRRC4Q9HBW1 653 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 NEK6Q9HC98 313 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 PARD6AQ9NPB6 346 aa10.04□□□□□ -0.8
APTX-216ENST00000472896 INTS10Q9NVR2 710 aaKnown RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 SPATA6Q9NWH7 488 aaPredicted RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 RALYQ9UKM9 306 aaKnown RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 PIN4Q9Y237 131 aaKnown RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 EIF3LQ9Y262 564 aaKnown RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 MAP1BP46821 2468 aaKnown RBP10.04□□□□□ -0.8
APTX-216ENST00000472896 DHRS12A0PJE2 317 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 WDR27A2RRH5 827 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 SAGE2PA6NJ88 616 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 HNRNPDLO14979 420 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 SNPHO15079 494 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 NPHS1O60500 1241 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 POMCP01189 267 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 SOD2P04179 222 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 SNRPB2P08579 225 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 UMPSP11172 480 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 CXCR2P25025 360 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 MZF1P28698 734 aaPredicted RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 IL12AP29459 219 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 NAMPTP43490 491 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 RPS9P46781 194 aaKnown RBP10.03□□□□□ -0.8
APTX-216ENST00000472896 PPP5CP53041 499 aa10.03□□□□□ -0.8
APTX-216ENST00000472896 LIMK2P53671 638 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms