RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 B4E171 279 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 PPP1R12AO14974 1030 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-210ENST00000472880 SLC4A1P02730 911 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 FAM87AP0C7U9 286 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 F3P13726 295 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 UGT1A3P35503 534 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 TSPAN7P41732 249 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 MAPK9P45984 424 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 ARSDP51689 593 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 CYP4F2P78329 520 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 ODF2Q5BJF6 829 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 DCAF12Q5T6F0 453 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 ALS2CLQ60I27 953 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 SLC9A4Q6AI14 798 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 IYDQ6PHW0 289 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 WDR74Q6RFH5 385 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-210ENST00000472880 CNTD1Q8N815 330 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 SLC35G2Q8TBE7 412 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 DNAJC7Q99615 494 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 SPATA16Q9BXB7 569 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 MAK16Q9BXY0 300 aaKnown RBP19.55■□□□□ 0.72
COL9A3-210ENST00000472880 ZFYVE1Q9HBF4 777 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 OCIAD1Q9NX40 245 aa19.55■□□□□ 0.72
COL9A3-210ENST00000472880 KIR2DS5A0A0G2JLQ3 304 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 A0A0G2JNG1 304 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 A8MU76 341 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 KIR2DS3K7RE56 304 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 GRID2O43424 1007 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 CBFA2T2O43439 604 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 NUAK1O60285 661 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 KRT1P04264 644 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 TPM1P09493 284 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 SFTPCP11686 197 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 EPHA4P54764 986 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 KIR2DS5Q14953 304 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 PDK1Q15118 436 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 PCSK7Q16549 785 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 TBR1Q16650 682 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 ASTE1Q2TB18 679 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-210ENST00000472880 NT5DC3Q86UY8 548 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 VSIG1Q86XK7 387 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 AVL9Q8NBF6 648 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 HTR3CQ8WXA8 447 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 NCSTNQ92542 709 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 AGAP3Q96P47 875 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 ANP32EQ9BTT0 268 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 ZSCAN5AQ9BUG6 496 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-210ENST00000472880 OSGEPL1Q9H4B0 414 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 RAD18Q9NS91 495 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 PDP2Q9P2J9 529 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 ATXN10Q9UBB4 475 aa19.54■□□□□ 0.72
COL9A3-210ENST00000472880 A6NCN8 305 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 OR5K4A6NMS3 321 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 MTA2O94776 668 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 SLC25A14O95258 325 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-210ENST00000472880 PIRTP0C851 137 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 ZFXP17010 805 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-210ENST00000472880 ARHGAP25P42331 645 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 DCDC1P59894 354 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 ANKS6Q68DC2 871 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 KDELC2Q7Z4H8 507 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 RFX6Q8HWS3 928 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 RHOT2Q8IXI1 618 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 CACNA2D3Q8IZS8 1091 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 BMPERQ8N8U9 685 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 IMP4Q96G21 291 aaKnown RBP19.53■□□□□ 0.72
COL9A3-210ENST00000472880 OLFM3Q96PB7 478 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 TEFMQ96QE5 360 aaKnown RBP19.53■□□□□ 0.72
COL9A3-210ENST00000472880 TRIB3Q96RU7 358 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 OR2AG1Q9H205 316 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 ARFGAP3Q9NP61 516 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 SHOC2Q9UQ13 582 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 ZNF711Q9Y462 761 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 PIEZO2Q9H5I5 2752 aa19.53■□□□□ 0.72
COL9A3-210ENST00000472880 C3orf70A6NLC5 250 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-210ENST00000472880 GPR89AB7ZAQ6 455 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 PYCARD-AS1I3L0S3 204 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 RAD1O60671 282 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 GPR89BP0CG08 455 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 LIFP15018 202 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 ZNF8P17098 575 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-210ENST00000472880 CRTC3Q6UUV7 619 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 NPNTQ6UXI9 565 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 TRAM1L1Q8N609 369 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 GPR26Q8NDV2 337 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 EID2BQ96D98 161 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 GPR63Q9BZJ6 419 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 BRD8Q9H0E9 1235 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 SLC25A51Q9H1U9 297 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 EPB41L1Q9H4G0 881 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 MAGEE1Q9HCI5 957 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 STARD5Q9NSY2 213 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 ABHD10Q9NUJ1 306 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 NFKBIL1Q9UBC1 381 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-210ENST00000472880 CPNE7Q9UBL6 633 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 KLHL3Q9UH77 587 aa19.52■□□□□ 0.72
COL9A3-210ENST00000472880 DYNLT1P63172 113 aa19.51■□□□□ 0.71
COL9A3-210ENST00000472880 CDK18Q07002 472 aa19.51■□□□□ 0.71
COL9A3-210ENST00000472880 INSCQ1MX18 579 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms