RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ITGA2BP08514 1039 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 MYCLP1P12525 358 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 KRT5P13647 590 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PLA2G2AP14555 144 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PDGFRAP16234 1089 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 DESP17661 470 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CR2P20023 1033 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 NFKBIAP25963 317 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CD82P27701 267 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CASP1P29466 404 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 SLC6A4P31645 630 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 FLT3P36888 993 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 ACVRL1P37023 503 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 RPL34P49207 117 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 FMO5P49326 533 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 SUOXP51687 545 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 NEK3P51956 506 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PLK1P53350 603 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CDH4P55283 916 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 RPS24P62847 133 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 ROM1Q03395 351 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 SLC20A2Q08357 652 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 FOXL1Q12952 345 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 DNAJC3Q13217 504 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PDCLQ13371 301 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PEX6Q13608 980 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 TRIM25Q14258 630 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 NRN1LQ496H8 165 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 ACCSLQ4AC99 568 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CBWD6Q4V339 395 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 DCAF6Q58WW2 860 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 ZMAT1Q5H9K5 638 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CBWD3Q5JTY5 395 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 EFHC1Q5JVL4 640 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 BRMS1LQ5PSV4 323 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CBWD5Q5RIA9 395 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 C1orf220Q5T0J3 134 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PMF1Q6P1K2 205 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 RFWD3Q6PCD5 774 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 LAYNQ6UX15 382 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 RBM44Q6ZP01 1051 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 FKBP9P1Q75LS8 142 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 BHLHA9Q7RTU4 235 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PTAR1Q7Z6K3 402 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 TAC4Q86UU9 113 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 HORMAD1Q86X24 394 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 ERICH1Q86X53 443 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 GATAD2AQ86YP4 633 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PHYKPLQ8IUZ5 450 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 ZC3H3Q8IXZ2 948 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 GRAMD1CQ8IYS0 662 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 LGI2Q8N0V4 545 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CCAR2Q8N163 923 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 SDR16C5Q8N3Y7 309 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 ZNF843Q8N446 348 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 FSTL5Q8N475 847 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 AADATQ8N5Z0 425 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 ZNF610Q8N9Z0 462 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 DCAF4L2Q8NA75 395 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 C1orf131Q8NDD1 294 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 PIK3C3Q8NEB9 887 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 TMIEQ8NEW7 156 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 OR14K1Q8NGZ2 314 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 WDR36Q8NI36 951 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 MAPK15Q8TD08 544 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CALML6Q8TD86 181 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 SMARCE1Q969G3 411 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 SLC35C1Q96A29 364 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 EEF2KMTQ96G04 330 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 MED8Q96G25 268 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 SLC39A13Q96H72 371 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 DHTKD1Q96HY7 919 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 HIC2Q96JB3 615 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 IL12RB2Q99665 862 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CALN1Q9BXU9 219 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 ENKD1Q9H0I2 346 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 NEUROG2Q9H2A3 272 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 C12orf65Q9H3J6 166 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 MTG2Q9H4K7 406 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CLMPQ9H6B4 373 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 DDIT4Q9NX09 232 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 DONSONQ9NYP3 566 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 KCMF1Q9P0J7 381 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 AKAP7Q9P0M2 348 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 SEPT10Q9P0V9 454 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 SERGEFQ9UGK8 458 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 IPO11Q9UI26 975 aaKnown RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 CLEC4EQ9ULY5 219 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 VWA7Q9Y334 891 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CSNK1G3Q9Y6M4 447 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 PCNX2A6NKB5 2137 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 CKAP5Q14008 2032 aa3.56□□□□□ -1.84
XRN1-209ENST00000472625 MUC22E2RYF6 1773 aaPredicted RBP3.56□□□□□ -1.84
XRN1-209ENST00000472625 PRSS38A1L453 326 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 TMEM110-MUSTN1A8MSY1 372 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 TTC34A8MYJ7 566 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 FFAR2O15552 330 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 KLK10O43240 276 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 TSPAN6O43657 245 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms