RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HHEXQ03014 270 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 CDK18Q07002 472 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.31■■□□□ 1.16
C9orf3-213ENST00000471978 ALS2CLQ60I27 953 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 TMEM71Q6P5X7 295 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 IYDQ6PHW0 289 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 MFSD7Q6UXD7 560 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 OR10G6Q8NH81 332 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 CARD9Q9H257 536 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 MAGEE1Q9HCI5 957 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 ARFGAP3Q9NP61 516 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 SARS2Q9NP81 518 aaKnown RBP22.31■■□□□ 1.16
C9orf3-213ENST00000471978 ATXN10Q9UBB4 475 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 INTUQ9ULD6 942 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 BOD1L1Q8NFC6 3051 aa22.31■■□□□ 1.16
C9orf3-213ENST00000471978 TENM4Q6N022 2769 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 GRID2O43424 1007 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 SPOPO43791 374 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 DUX1O43812 170 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 NUAK1O60285 661 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 SNX2O60749 519 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 SLC4A1P02730 911 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 PLA2G2AP14555 144 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 COMTP21964 271 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 NFATC2Q13469 925 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 TCEAL1Q15170 157 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 ZNF569Q5MCW4 686 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 TMC3Q7Z5M5 1100 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 CNGA4Q8IV77 575 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 GPR26Q8NDV2 337 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 CCDC112Q8NEF3 446 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 SPATA22Q8NHS9 363 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 TADA1Q96BN2 335 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 MED8Q96G25 268 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 ZSCAN5AQ9BUG6 496 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 GPR63Q9BZJ6 419 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 OR2AG1Q9H205 316 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 STN1Q9H668 368 aaKnown RBP22.3■■□□□ 1.16
C9orf3-213ENST00000471978 GLOD4Q9HC38 313 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 RAD18Q9NS91 495 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 ZNF711Q9Y462 761 aa22.3■■□□□ 1.16
C9orf3-213ENST00000471978 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-213ENST00000471978 AKR1B15C9JRZ8 316 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-213ENST00000471978 STMND1H3BQB6 276 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 SLC25A14O95258 325 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-213ENST00000471978 MT-CYBP00156 380 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-213ENST00000471978 SLC2A4P14672 509 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 ZNF8P17098 575 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-213ENST00000471978 DCDC1P59894 354 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 SLC14A2Q15849 920 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 TEX44Q53QW1 395 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 ZNF648Q5T619 568 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-213ENST00000471978 CCDC70Q6NSX1 233 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 PMEPA1Q969W9 287 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 HERPUD2Q9BSE4 406 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 TRIM39Q9HCM9 518 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 PCDHGA3Q9Y5H0 932 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 COL6A6A6NMZ7 2263 aa22.29■■□□□ 1.16
C9orf3-213ENST00000471978 A0A0A6YYK5 440 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-213ENST00000471978 A6NCN8 305 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 F3P13726 295 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 CDKN2BP42772 138 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 NOP2P46087 812 aaKnown RBP22.28■■□□□ 1.16
C9orf3-213ENST00000471978 NR2C2P49116 596 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 TFDP2Q14188 446 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 BZW1Q7L1Q6 419 aaKnown RBP22.28■■□□□ 1.16
C9orf3-213ENST00000471978 SLC9B2Q86UD5 537 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 PHYKPLQ8IUZ5 450 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 TRAM1L1Q8N609 369 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 ZSCAN1Q8NBB4 408 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 JPH3Q8WXH2 748 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-213ENST00000471978 ART4Q93070 314 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 SH3KBP1Q96B97 665 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 OCIAD1Q9NX40 245 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 SLC39A1Q9NY26 324 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 PDP2Q9P2J9 529 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 NFKBIL1Q9UBC1 381 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-213ENST00000471978 SAE1Q9UBE0 346 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-213ENST00000471978 PCDHGA4Q9Y5G9 962 aa22.28■■□□□ 1.16
C9orf3-213ENST00000471978 KIR2DS5A0A0G2JLQ3 304 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 A0A0G2JNG1 304 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 KIR2DS3K7RE56 304 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 PMPCBO75439 489 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 NDST3O95803 873 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 PTPN3P26045 913 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 ARSDP51689 593 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 TBX2Q13207 712 aaPredicted RBP22.27■■□□□ 1.16
C9orf3-213ENST00000471978 KIR2DS5Q14953 304 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 PRKD1Q15139 912 aaPredicted RBP22.27■■□□□ 1.16
C9orf3-213ENST00000471978 LLGL1Q15334 1064 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 SNAP47Q5SQN1 464 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 PDPK2PQ6A1A2 396 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 WDR74Q6RFH5 385 aaPredicted RBP22.27■■□□□ 1.16
C9orf3-213ENST00000471978 FAM129CQ86XR2 697 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 TFB1MQ8WVM0 346 aaKnown RBP22.27■■□□□ 1.16
C9orf3-213ENST00000471978 NCSTNQ92542 709 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 GLYATL1Q969I3 302 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 TEKT5Q96M29 485 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 DDA1Q9BW61 102 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 PRDM8Q9NQV8 689 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms