RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 SLC35F5Q8WV83 523 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 BTN2A2Q8WVV5 523 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 FIG4Q92562 907 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SIPA1Q96FS4 1042 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 KLHL32Q96NJ5 620 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 UNKQ9C0B0 810 aaKnown RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 RNF39Q9H2S5 420 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SSU72Q9NP77 194 aaKnown RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 NPC1O15118 1278 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 HIST1H2ABP04908 130 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 ENO2P09104 434 aaPredicted RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 ANPEPP15144 967 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 TCF3P15923 654 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 HIST3H2AQ7L7L0 130 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 ZNF554Q86TJ5 538 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 CYP4X1Q8N118 509 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 HIST1H2ACQ93077 130 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 NDNQ99608 321 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 WDR6Q9NNW5 1121 aaKnown RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SLC2A4RGQ9NR83 387 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 LIMD1Q9UGP4 676 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 REXO2Q9Y3B8 237 aaKnown RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 IGKV6D-21A0A0A0MT36 114 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 MAN2B1O00754 1011 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 WNT9AO14904 365 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 NOS3P29474 1203 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SSR2P43308 183 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 ACAP2Q15057 778 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SF1Q15637 639 aaKnown RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 ITPRIPL2Q3MIP1 535 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 GDPD4Q6W3E5 623 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 C16orf62Q7Z3J2 963 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SNX20Q7Z614 316 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 ULK2Q8IYT8 1036 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 DCAF4L2Q8NA75 395 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 TTLQ8NG68 377 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 ITFG1Q8TB96 612 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 METTL21AQ8WXB1 218 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 LRIG1Q96JA1 1093 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 ZNF607Q96SK3 696 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 TMEM109Q9BVC6 243 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 RHBGQ9H310 441 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 EPB41L4BQ9H329 900 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 NOL6Q9H6R4 1146 aaKnown RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 CCDC177Q9NQR7 707 aaPredicted RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 USE1Q9NZ43 259 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 IGKV6-21A0A0C4DH24 114 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SMNDC1O75940 238 aaKnown RBP eCLIP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 C2P06681 752 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 PSMB9P28065 219 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SOX11P35716 441 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 LIMK2P53671 638 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 PTPN5P54829 565 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 TRAF2Q12933 501 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 SEMA5AQ13591 1074 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 TMEM63BQ5T3F8 832 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 RNASEH2BQ5TBB1 312 aaKnown RBP9.45□□□□□ -0.9
UBE3C-205ENST00000470408 MSANTD2Q6P1R3 559 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 C16orf46Q6P387 395 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 HDDC3Q8N4P3 179 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 KLHL23Q8NBE8 558 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 TSPAN14Q8NG11 270 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 OR6K2Q8NGY2 324 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 OR10G6Q8NH81 332 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 PHF24Q9UPV7 400 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 DMTF1Q9Y222 760 aa9.45□□□□□ -0.9
UBE3C-205ENST00000470408 DNAJC25-GNG10A0A024R161 153 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 MT-CO1P00395 513 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 ZNF24P17028 368 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 SYN1P17600 705 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 PAICSP22234 425 aaKnown RBP9.44□□□□□ -0.9
UBE3C-205ENST00000470408 FECHP22830 423 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 BUD31P41223 144 aaPredicted RBP9.44□□□□□ -0.9
UBE3C-205ENST00000470408 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 KCTD21Q4G0X4 260 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 MFSD5Q6N075 450 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 APTXQ7Z2E3 356 aaKnown RBP9.44□□□□□ -0.9
UBE3C-205ENST00000470408 CAMK1DQ8IU85 385 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 OR2AP1Q8NGE2 309 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 PSMG2Q969U7 264 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 PPCDCQ96CD2 204 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 ZSCAN5AQ9BUG6 496 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 HERC2P3Q9BVR0 1158 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 SLC2A11Q9BYW1 496 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 REEP1Q9H902 201 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 TIMMDC1Q9NPL8 285 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 CCDC167Q9P0B6 97 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 LAMB4A4D0S4 1761 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 RGSL1A5PLK6 1076 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 FNBP1LQ5T0N5 605 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 TRABD2AQ86V40 505 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 CDYL2Q8N8U2 506 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 PCDH19Q8TAB3 1148 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 CPT1BQ92523 772 aa9.44□□□□□ -0.9
UBE3C-205ENST00000470408 ITM2CQ9NQX7 267 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms