RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 DEF8Q6ZN54 512 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 ZNF540Q8NDQ6 660 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 GINS4Q9BRT9 223 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 CCDC28BQ9BUN5 200 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 HMG20AQ9NP66 347 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 COQ4Q9Y3A0 265 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 CCR3P51677 355 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 TSTD2Q5T7W7 516 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 CPSF7Q8N684 471 aaKnown RBP15.69■□□□□ 0.1
BRAT1-204ENST00000469750 FUBP3Q96I24 572 aaKnown RBP eCLIP15.69■□□□□ 0.1
BRAT1-204ENST00000469750 PRDM8Q9NQV8 689 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 EXD2Q9NVH0 621 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 DUS2Q9NX74 493 aaKnown RBP15.69■□□□□ 0.1
BRAT1-204ENST00000469750 ZNF624Q9P2J8 865 aaPredicted RBP15.69■□□□□ 0.1
BRAT1-204ENST00000469750 ERVW-1Q9UQF0 538 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 ERGIC3Q9Y282 383 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 MYO5BQ9ULV0 1848 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 ZNF37AP17032 561 aaPredicted RBP15.69■□□□□ 0.1
BRAT1-204ENST00000469750 LDB1Q86U70 411 aaPredicted RBP15.69■□□□□ 0.1
BRAT1-204ENST00000469750 CLHC1Q8NHS4 586 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 SLC47A1Q96FL8 570 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 TEFMQ96QE5 360 aaKnown RBP15.69■□□□□ 0.1
BRAT1-204ENST00000469750 MCMBPQ9BTE3 642 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 MAT2BQ9NZL9 334 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 ATRNL1Q5VV63 1379 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 IL6P05231 212 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 CYP4F2P78329 520 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 ZYG11AQ6WRX3 759 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 GK5Q6ZS86 529 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 KRT77Q7Z794 578 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 CIR1Q86X95 450 aaPredicted RBP15.69■□□□□ 0.1
BRAT1-204ENST00000469750 MCRS1Q96EZ8 462 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 C7orf26Q96N11 449 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 FANCEQ9HB96 536 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 SALL4Q9UJQ4 1053 aa15.69■□□□□ 0.1
BRAT1-204ENST00000469750 VIRMAQ69YN4 1812 aaKnown RBP15.68■□□□□ 0.1
BRAT1-204ENST00000469750 FASTKD3Q14CZ7 662 aaKnown RBP15.68■□□□□ 0.1
BRAT1-204ENST00000469750 SLC1A5Q15758 541 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 NPY5RQ15761 445 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 MZT2AQ6P582 158 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 IZUMO1Q8IYV9 350 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 OR7A2PQ8NGA2 310 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 OSBPL11Q9BXB4 747 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-204ENST00000469750 H3BNH8 94 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 NFAT5O94916 1531 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 KIR3DL1P43629 444 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 ASMTP46597 345 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 PPM1JQ5JR12 505 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 GPR135Q8IZ08 494 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 TWIST2Q8WVJ9 160 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 NEK6Q9HC98 313 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 MIOSQ9NXC5 875 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 SNX10Q9Y5X0 201 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 YJEFN3A6XGL0 299 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 H0YC42 278 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 CLDN9O95484 217 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 NAE1Q13564 534 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 ACAP2Q15057 778 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 RFTN2Q52LD8 501 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-204ENST00000469750 TEX47Q8TBZ9 253 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 TCF25Q9BQ70 676 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 HEPHQ9BQS7 1158 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 RACGAP1Q9H0H5 632 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 IPPKQ9H8X2 491 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 ARL8BQ9NVJ2 186 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 SAMD4AQ9UPU9 718 aaKnown RBP15.68■□□□□ 0.1
BRAT1-204ENST00000469750 FCF1Q9Y324 198 aaKnown RBP15.68■□□□□ 0.1
BRAT1-204ENST00000469750 TAF4O00268 1085 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 TSC22D2O75157 780 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 VIPP01282 170 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 RPL17P18621 184 aaKnown RBP15.68■□□□□ 0.1
BRAT1-204ENST00000469750 GSTT1P30711 240 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 RPIAP49247 311 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 CAP1Q01518 475 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 CCNYL2Q5T2Q4 361 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 C9orf64Q5T6V5 341 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 PRSS55Q6UWB4 352 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-204ENST00000469750 OR14C36Q8NHC7 312 aa15.68■□□□□ 0.1
BRAT1-204ENST00000469750 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-204ENST00000469750 SLIT2O94813 1529 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 MT-CYBP00156 380 aaPredicted RBP15.67■□□□□ 0.1
BRAT1-204ENST00000469750 GALNT18Q6P9A2 607 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 CEP68Q76N32 757 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 ZNF248Q8NDW4 579 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 PSMG2Q969U7 264 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 MAP10Q9P2G4 905 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 ERVK-21P61565 698 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 DRICH1Q6PGQ1 229 aaPredicted RBP15.67■□□□□ 0.1
BRAT1-204ENST00000469750 GALNT13Q8IUC8 556 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 SRFBP1Q8NEF9 429 aaKnown RBP15.67■□□□□ 0.1
BRAT1-204ENST00000469750 DNAJC28Q9NX36 388 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 CCDC85CA6NKD9 419 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 VNN1O95497 513 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 IL12RB1P42701 662 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 ESRP1Q6NXG1 681 aaKnown RBP15.67■□□□□ 0.1
BRAT1-204ENST00000469750 TBC1D21Q8IYX1 336 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 AMER2Q8N7J2 671 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 PCDH19Q8TAB3 1148 aa15.67■□□□□ 0.1
BRAT1-204ENST00000469750 ING5Q8WYH8 240 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms