RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 SLC30A5Q8TAD4 765 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 OTUB2Q96DC9 234 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 TCEAL4Q96EI5 215 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 PTCD3Q96EY7 689 aaKnown RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 HSFY1Q96LI6 401 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 KCNK16Q96T55 309 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 TTLL2Q9BWV7 592 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 STK33Q9BYT3 514 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 AMBRA1Q9C0C7 1298 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 SERHL2Q9H4I8 314 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 TRPV4Q9HBA0 871 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 CSNK1G1Q9HCP0 422 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 PLCB1Q9NQ66 1216 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 CNGB3Q9NQW8 809 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 ABCC13Q9NSE7 274 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 ZSCAN32Q9NX65 697 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 DUS2Q9NX74 493 aaKnown RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 ITGB1BP2Q9UKP3 347 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 NDRG4Q9ULP0 352 aaKnown RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 CA14Q9ULX7 337 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 DMTF1Q9Y222 760 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 REXO2Q9Y3B8 237 aaKnown RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.43□□□□□ -1.381e-10■□□□□ 10.5
PTCD3-208ENST00000469585 CHD7Q9P2D1 2997 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 BRWD1Q9NSI6 2320 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 LOC102723971A0A1B0GUV8 181 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF840PA6NDX5 716 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 CLCA1A8K7I4 914 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 PROM1O43490 865 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 HCRTO43612 131 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ATG13O75143 517 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 LSM8O95777 96 aaKnown RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 APOEP02649 317 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 SLC2A3P11169 496 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 PPP3CBP16298 524 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 FERP16591 822 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 TNFRSF1AP19438 455 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 IL1R2P27930 398 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 CD6P30203 668 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 NSFP46459 744 aaKnown RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 YWHAGP61981 247 aaKnown RBP eCLIP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ADIGQ0VDE8 80 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 PMS2P11Q13670 270 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 TRIM14Q14142 442 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 MTF1Q14872 753 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 DRAP1Q14919 205 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 EFHC1Q5JVL4 640 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 DGKKQ5KSL6 1271 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ABHD17BQ5VST6 288 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 FCRL6Q6DN72 434 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 SFRP4Q6FHJ7 346 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 TANGO2Q6ICL3 276 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 CRIP3Q6Q6R5 217 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 TPRG1Q6ZUI0 275 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 RNF44Q7L0R7 432 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 CCDC186Q7Z3E2 898 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 PIGZQ86VD9 579 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 RALGPS2Q86X27 583 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ERICH1Q86X53 443 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 TMC8Q8IU68 726 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ZDHHC17Q8IUH5 632 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 UNC45BQ8IWX7 931 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ARL14EPQ8N8R7 260 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 UBA3Q8TBC4 463 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 IRGQQ8WZA9 623 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ANP32BQ92688 251 aaKnown RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 FGF14Q92915 247 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 KIAA1191Q96A73 305 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 XPO6Q96QU8 1125 aaKnown RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 PPP1R9BQ96SB3 815 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 PKMYT1Q99640 499 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 SDCBP2Q9H190 292 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 CXorf36Q9H7Y0 433 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF334Q9HCZ1 680 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 TBCCD1Q9NVR7 557 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 CLIC5Q9NZA1 410 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF212Q9UDV6 495 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 HMGXB4Q9UGU5 601 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 LIMA1Q9UHB6 759 aaKnown RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 CHORDC1Q9UHD1 332 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-208ENST00000469585 TAGLN3Q9UI15 199 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 CDH22Q9UJ99 828 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 RASAL2Q9UJF2 1139 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 STAP1Q9ULZ2 295 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 ARHGAP26Q9UNA1 814 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 CPQQ9Y646 472 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 PIAS3Q9Y6X2 628 aa6.42□□□□□ -1.38
PTCD3-208ENST00000469585 SZT2Q5T011 3432 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 C2orf16Q68DN1 1984 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 KANSL1LA0AUZ9 987 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 NPIPB8E9PQR5 432 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 O00370 1275 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 AREL1O15033 823 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 IRF1P10914 325 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 ITGAMP11215 1152 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 RARGP13631 454 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 HMGA1P17096 107 aaKnown RBP6.41□□□□□ -1.38
PTCD3-208ENST00000469585 ABCB4P21439 1286 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms