RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 BCAP29Q9UHQ4 241 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 NDUFAF1Q9Y375 327 aa17.72■□□□□ 0.43
MCF2L-221ENST00000469415 GREB1Q4ZG55 1949 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 A0A1B0GVG6 124 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 CLPTM1O96005 669 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 TM4SF4P48230 202 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 MAPKAPK2P49137 400 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 RHOAP61586 193 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 SMAD3P84022 425 aaKnown RBP17.71■□□□□ 0.43
MCF2L-221ENST00000469415 HERC3Q15034 1050 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 FUBP1Q96AE4 644 aaKnown RBP17.71■□□□□ 0.43
MCF2L-221ENST00000469415 SLCO4A1Q96BD0 722 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 TNKS2Q9H2K2 1166 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 AFF4Q9UHB7 1163 aaKnown RBP17.71■□□□□ 0.43
MCF2L-221ENST00000469415 VWA8A3KMH1 1905 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 ANKRD66B4E2M5 251 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 PLOD2O00469 737 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 CASQ2O14958 399 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-221ENST00000469415 INPP4BO15327 924 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 CA5AP35218 305 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 HK2P52789 917 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 LYSMD3Q7Z3D4 306 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 TMEM102Q8N9M5 508 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-221ENST00000469415 TDRD1Q9BXT4 1180 aaKnown RBP17.71■□□□□ 0.43
MCF2L-221ENST00000469415 SOX17Q9H6I2 414 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-221ENST00000469415 DDX18Q9NVP1 670 aaKnown RBP17.71■□□□□ 0.43
MCF2L-221ENST00000469415 ZDHHC7Q9NXF8 308 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 SLC4A7Q9Y6M7 1214 aa17.71■□□□□ 0.43
MCF2L-221ENST00000469415 GOLGA4Q13439 2230 aaKnown RBP17.71■□□□□ 0.43
MCF2L-221ENST00000469415 PRSS51A0A1B0GVH4 220 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 PRRG1O14668 218 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 IGLV3-27P01718 113 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 LPOP22079 712 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-221ENST00000469415 HK3P52790 923 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 CDH15P55291 814 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 MYBPC1Q00872 1141 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 NFYCQ13952 458 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 ARMC12Q5T9G4 340 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 DNAJC14Q6Y2X3 702 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-221ENST00000469415 ARL14EPQ8N8R7 260 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-221ENST00000469415 FNDC5Q8NAU1 212 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 TRIB3Q96RU7 358 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 SPATA16Q9BXB7 569 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 TRPM5Q9NZQ8 1165 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 PTPRDP23468 1912 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 PKMP14618 531 aaKnown RBP17.7■□□□□ 0.42
MCF2L-221ENST00000469415 LBPP18428 481 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 HTR6P50406 440 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 ZNF140P52738 457 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-221ENST00000469415 ARF5P84085 180 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 TBCELQ5QJ74 424 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 C6orf10Q5SRN2 563 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 RBM44Q6ZP01 1051 aaKnown RBP17.7■□□□□ 0.42
MCF2L-221ENST00000469415 ZBTB49Q6ZSB9 765 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 ANKS3Q6ZW76 656 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 TMEM79Q9BSE2 394 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.7■□□□□ 0.42
MCF2L-221ENST00000469415 MAGEH1Q9H213 219 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 ZNF225Q9UK10 706 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 CNOT6Q9ULM6 557 aaKnown RBP17.7■□□□□ 0.42
MCF2L-221ENST00000469415 DOCK4Q8N1I0 1966 aa17.7■□□□□ 0.42
MCF2L-221ENST00000469415 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 VPS26AO75436 327 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 PAGE3Q5JUK9 113 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 ZFP1Q6P2D0 407 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 FRA10AC1Q70Z53 315 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 GPSM1Q86YR5 675 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 MYLIPQ8WY64 445 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 MTFMTQ96DP5 389 aaKnown RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 L3HYPDHQ96EM0 354 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 BIRC8Q96P09 236 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 MGME1Q9BQP7 344 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 SYTL2Q9HCH5 934 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 FAM92AA1XBS5 289 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 KRT87PA6NCN2 255 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 H3BNC9 293 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 TMEM189-UBE2V1I3L0A0 370 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 SMAD6O43541 496 aaKnown RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 RPLP2P05387 115 aaKnown RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 HSPA1AP0DMV8 641 aaKnown RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 HSPA1BP0DMV9 641 aaKnown RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 OXTRP30559 389 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 ADSLP30566 484 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 LCP2Q13094 533 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 SLC14A2Q15849 920 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 PCYOX1LQ8NBM8 494 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 SKA2Q8WVK7 121 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 SMG9Q9H0W8 520 aaKnown RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 Q9H521 79 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 NLE1Q9NVX2 485 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 ARVCFO00192 962 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 CDH4P55283 916 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 SAMD4BQ5PRF9 694 aaKnown RBP17.69■□□□□ 0.42
MCF2L-221ENST00000469415 AP1ARQ63HQ0 302 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 KRT80Q6KB66 452 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 SLC15A3Q8IY34 581 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 OR2T11Q8NH01 316 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 PHF12Q96QT6 1004 aa17.69■□□□□ 0.42
MCF2L-221ENST00000469415 HMX1Q9NP08 348 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms