RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 A0A1W2PRG6 482 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 KPNA5O15131 536 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 RGS5O15539 181 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 NBNO60934 754 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 GNRH1P01148 92 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 MLLT10P55197 1068 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 MBTPS1Q14703 1052 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 LEXMQ3ZCV2 418 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 ABHD11Q8NFV4 315 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 TTC9Q92623 222 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 ATXN7L3BQ96GX2 97 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 OSBPL11Q9BXB4 747 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 EDEM3Q9BZQ6 932 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 CD93Q9NPY3 652 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 TRPS1Q9UHF7 1281 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 EIF3LQ9Y262 564 aaKnown RBP9.91□□□□□ -0.82
NUP50-214ENST00000469163 ADGRA2Q96PE1 1338 aa9.91□□□□□ -0.82
NUP50-214ENST00000469163 KCNK1O00180 336 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 PITPNM1O00562 1244 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 HOXA2O43364 376 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 INMTO95050 263 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 GSNP06396 782 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 PROS1P07225 676 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 ODC1P11926 461 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 MYOGP15173 224 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 SERPINB5P36952 375 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 MAPKAPK2P49137 400 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 UBAP2LQ14157 1087 aaKnown RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 GEN1Q17RS7 908 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 LHX8Q68G74 356 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 PIWIL3Q7Z3Z3 882 aaKnown RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 CTAGE3PQ8IX95 158 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 DEFB107AQ8IZN7 70 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 FAM71DQ8N9W8 422 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 MAGED4Q96JG8 741 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 GPR62Q9BZJ7 368 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 MIR1-1HGQ9H1L0 117 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 ITM2CQ9NQX7 267 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 ENTPD7Q9NQZ7 604 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 DNMT3BQ9UBC3 853 aaKnown RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 WARS2Q9UGM6 360 aaKnown RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 EVLQ9UI08 416 aaPredicted RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 ZNFX1Q9P2E3 1918 aaKnown RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 A0A0G2JMP0 313 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 F7P08709 466 aaPredicted RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 IL10P22301 178 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 KELP23276 732 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 PTPRZ1P23471 2315 aaPredicted RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 GRIA3P42263 894 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 ERVK-8P63133 956 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 CDC42EP1Q00587 391 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 PCDH1Q08174 1060 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 TRAP1Q12931 704 aaKnown RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 UBXN11Q5T124 520 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 ATAD3CQ5T2N8 411 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 RBM20Q5T481 1227 aaKnown RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 PLPP4Q5VZY2 271 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 SPRED2Q7Z698 418 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 SLFN11Q7Z7L1 901 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 NT5DC3Q86UY8 548 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 TRABD2AQ86V40 505 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 PM20D2Q8IYS1 436 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 BPIFB6Q8NFQ5 453 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 ZNF420Q8TAQ5 688 aaPredicted RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 KLF6Q99612 283 aaPredicted RBP9.9□□□□□ -0.82
NUP50-214ENST00000469163 ATXN3LQ9H3M9 355 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 SLA2Q9H6Q3 261 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 PTPRHQ9HD43 1115 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 TAS2R7Q9NYW3 318 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 MALT1Q9UDY8 824 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 ACTL7BQ9Y614 415 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 PAPPA2Q9BXP8 1791 aa9.9□□□□□ -0.82
NUP50-214ENST00000469163 LOC100653049A0A140TA62 436 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 BTN3A1O00481 513 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 NRP1O14786 923 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 CILPO75339 1184 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 BANF1O75531 89 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 KRT34O76011 436 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 PDGFAP04085 211 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 MTHFD1P11586 935 aaKnown RBP9.9□□□□□ -0.83
NUP50-214ENST00000469163 FGFR3P22607 806 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 MIPP30301 263 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 BNIP2Q12982 314 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 GPS1Q13098 491 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 PAGE2BQ5JRK9 111 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 TRIM72Q6ZMU5 477 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 NECAB2Q7Z6G3 386 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 C12orf56Q8IXR9 622 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 BADQ92934 168 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 SEMA6AQ9H2E6 1030 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 TRIM45Q9H8W5 580 aaPredicted RBP9.9□□□□□ -0.83
NUP50-214ENST00000469163 ASNSD1Q9NWL6 643 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 ZNF224Q9NZL3 707 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 CDH22Q9UJ99 828 aa9.9□□□□□ -0.83
NUP50-214ENST00000469163 GREB1LQ9C091 1923 aaPredicted RBP9.89□□□□□ -0.83
NUP50-214ENST00000469163 B4GALT3O60512 393 aa9.89□□□□□ -0.83
NUP50-214ENST00000469163 HMGN1P05114 100 aa9.89□□□□□ -0.83
NUP50-214ENST00000469163 CHRNA3P32297 505 aa9.89□□□□□ -0.83
NUP50-214ENST00000469163 OGDHQ02218 1023 aa9.89□□□□□ -0.83
NUP50-214ENST00000469163 DSC1Q08554 894 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms