RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ZNF295-AS1Q8N0V1 137 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 ARL10Q8N8L6 244 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 GPR156Q8NFN8 814 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 CCHCR1Q8TD31 782 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 NAT6Q93015 286 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 HIC2Q96JB3 615 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 GORASP1Q9BQQ3 440 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 TSGA10Q9BZW7 698 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 FAM83DQ9H4H8 585 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 C10orf88Q9H8K7 445 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 ZNF395Q9H8N7 513 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-205ENST00000468338 CYP4F12Q9HCS2 524 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 UBP1Q9NZI7 540 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 PKD2L2Q9NZM6 624 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 KLHL8Q9P2G9 620 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-205ENST00000468338 VTI1BQ9UEU0 232 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 CD84Q9UIB8 345 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 PACSIN2Q9UNF0 486 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-205ENST00000468338 ST14Q9Y5Y6 855 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 TRABD2BA6NFA1 517 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 FADS2P1A8MWK0 482 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 H7C0C1 242 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 TAF4O00268 1085 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 NOBOXO60393 691 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 ZNF189O75820 626 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-205ENST00000468338 MT-CO3P00414 261 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 JUPP14923 745 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 HMGCLP35914 325 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 ATP5OP48047 213 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 POLD2P49005 469 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 CLDN6P56747 220 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 EIF3EP60228 445 aaKnown RBP11.07□□□□□ -0.64
COL4A6-205ENST00000468338 TARDBPQ13148 414 aaKnown RBP eCLIP11.07□□□□□ -0.64
COL4A6-205ENST00000468338 PCSK7Q16549 785 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 RANBP10Q6VN20 620 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 KDELC2Q7Z4H8 507 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 NRROSQ86YC3 692 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 TREML1Q86YW5 311 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 CDKL3Q8IVW4 592 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-205ENST00000468338 CCL4L1Q8NHW4 92 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 SLC35B2Q8TB61 432 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 IFI44Q8TCB0 444 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 DTX3LQ8TDB6 740 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 SREK1Q8WXA9 508 aaKnown RBP11.07□□□□□ -0.64
COL4A6-205ENST00000468338 GBA3Q9H227 469 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 TRABDQ9H4I3 376 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 CARS2Q9HA77 564 aaKnown RBP11.07□□□□□ -0.64
COL4A6-205ENST00000468338 VPS18Q9P253 973 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 PADI4Q9UM07 663 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 SUFUQ9UMX1 484 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 SHOC2Q9UQ13 582 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 CLCA2Q9UQC9 943 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 SPO11Q9Y5K1 396 aa11.07□□□□□ -0.64
COL4A6-205ENST00000468338 C5orf60A6NFR6 353 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 AURKAO14965 403 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 PIRTP0C851 137 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 BPIP17213 487 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 HLA-DPA1P20036 260 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 GPC1P35052 558 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 ADRA1AP35348 466 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 ADCY8P40145 1251 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 CHRNA4P43681 627 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 MSLNQ13421 630 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-205ENST00000468338 RTP5Q14D33 572 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 SLC1A5Q15758 541 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 ST3GAL2Q16842 350 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 PYCR3Q53H96 274 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 SIRPB2Q5JXA9 342 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 ANKRD20A2Q5SQ80 823 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 PERM1Q5SV97 790 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 CCDC181Q5TID7 509 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 ANKRD20A1Q5TYW2 823 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 ANKRD20A3Q5VUR7 823 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 PDPK2PQ6A1A2 396 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 ITPRIPL1Q6GPH6 555 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 CCDC70Q6NSX1 233 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 EFL1Q7Z2Z2 1120 aaKnown RBP11.06□□□□□ -0.64
COL4A6-205ENST00000468338 TAF8Q7Z7C8 310 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 TTC30BQ8N4P2 665 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 KYQ8NBH2 561 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 GPR26Q8NDV2 337 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 OR6C4Q8NGE1 309 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 SPATA13Q96N96 652 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 FAM118BQ9BPY3 351 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 NRSN2Q9GZP1 204 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 ZFAND3Q9H8U3 227 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 RAD18Q9NS91 495 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 HACD3Q9P035 362 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 RSPH14Q9UHP6 348 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 GUCA1BQ9UMX6 200 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 GPR34Q9UPC5 381 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 OAS3Q9Y6K5 1087 aaKnown RBP11.06□□□□□ -0.64
COL4A6-205ENST00000468338 KIF26BQ2KJY2 2108 aa11.06□□□□□ -0.64
COL4A6-205ENST00000468338 ANKRD11Q6UB99 2663 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-205ENST00000468338 TCRBV7S2A1N4TA0A589 114 aa11.05□□□□□ -0.64
COL4A6-205ENST00000468338 CPED1A4D0V7 1026 aa11.05□□□□□ -0.64
COL4A6-205ENST00000468338 GOLGA6CA6NDK9 693 aa11.05□□□□□ -0.64
COL4A6-205ENST00000468338 GOLGA6BA6NDN3 693 aa11.05□□□□□ -0.64
COL4A6-205ENST00000468338 GOLGA6L9A6NEM1 432 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms