RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 EPB41L5Q9HCM4 733 aa11.43□□□□□ -0.58
CDHR3-205ENST00000468143 TRIM39Q9HCM9 518 aa11.43□□□□□ -0.58
CDHR3-205ENST00000468143 LZTFL1Q9NQ48 299 aa11.43□□□□□ -0.58
CDHR3-205ENST00000468143 RAD18Q9NS91 495 aa11.43□□□□□ -0.58
CDHR3-205ENST00000468143 VPS18Q9P253 973 aa11.43□□□□□ -0.58
CDHR3-205ENST00000468143 APPL1Q9UKG1 709 aa11.43□□□□□ -0.58
CDHR3-205ENST00000468143 TMPRSS11EQ9UL52 423 aa11.43□□□□□ -0.58
CDHR3-205ENST00000468143 MAP1BP46821 2468 aaKnown RBP11.43□□□□□ -0.58
CDHR3-205ENST00000468143 LRP4O75096 1905 aa11.43□□□□□ -0.58
CDHR3-205ENST00000468143 GPR39O43194 453 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 KRT86O43790 486 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 NUDT21O43809 227 aaKnown RBP11.42□□□□□ -0.58
CDHR3-205ENST00000468143 NUAK1O60285 661 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 METTL18O95568 372 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 HLA-DPA1P20036 260 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 ITPKBP27987 946 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 CA5AP35218 305 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 ACTN2P35609 894 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 HMGCLP35914 325 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 EIF2S3P41091 472 aaKnown RBP11.42□□□□□ -0.58
CDHR3-205ENST00000468143 LSSP48449 732 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 INHBCP55103 352 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 GDF10P55107 478 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 DCDC1P59894 354 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 KLF1Q13351 362 aaPredicted RBP11.42□□□□□ -0.58
CDHR3-205ENST00000468143 CHRNA6Q15825 494 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 COL28A1Q2UY09 1125 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 ATP13A5Q4VNC0 1218 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 KHDC1Q4VXA5 237 aaKnown RBP11.42□□□□□ -0.58
CDHR3-205ENST00000468143 NKAIN2Q5VXU1 208 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 FAM151BQ6UXP7 276 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 TMPRSS9Q7Z410 1059 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 SPRED1Q7Z699 444 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 ZNF761Q86XN6 746 aaPredicted RBP11.42□□□□□ -0.58
CDHR3-205ENST00000468143 TTC13Q8NBP0 860 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 WDR48Q8TAF3 677 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 GDAP1Q8TB36 358 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 ATG4AQ8WYN0 398 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 FGF11Q92914 225 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 SPATA13Q96N96 652 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 TMEM121Q9BTD3 319 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 TSGA10Q9BZW7 698 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 CARD9Q9H257 536 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 TRABDQ9H4I3 376 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 RDH14Q9HBH5 336 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 IL26Q9NPH9 171 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 IL17CQ9P0M4 197 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 TBC1D29Q9UFV1 150 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 SLC23A2Q9UGH3 650 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 AAR2Q9Y312 384 aaKnown RBP11.42□□□□□ -0.58
CDHR3-205ENST00000468143 KCTD3Q9Y597 815 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 ARL5AQ9Y689 179 aa11.42□□□□□ -0.58
CDHR3-205ENST00000468143 CEP295Q9C0D2 2601 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 CACNA1BQ00975 2339 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 C5orf60A6NFR6 353 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 D6RAR5 112 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 STX7O15400 261 aaKnown RBP11.41□□□□□ -0.58
CDHR3-205ENST00000468143 CDK14O94921 469 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 HGFP14210 728 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 PNLIPP16233 465 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 RBMS1P29558 406 aaKnown RBP11.41□□□□□ -0.58
CDHR3-205ENST00000468143 ADRA1AP35348 466 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 SPAM1P38567 509 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 CCDC173Q0VFZ6 552 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 PEX6Q13608 980 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 LRP8Q14114 963 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 TBC1D25Q3MII6 688 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 RANBP10Q6VN20 620 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 ARHGEF18Q6ZSZ5 1173 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 PHYKPLQ8IUZ5 450 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 SLC35B2Q8TB61 432 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 CRELD1Q96HD1 420 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 PRR11Q96HE9 360 aaPredicted RBP11.41□□□□□ -0.58
CDHR3-205ENST00000468143 PLEKHG4BQ96PX9 1271 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 SEMA6CQ9H3T2 930 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 RMI1Q9H9A7 625 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 PRDM8Q9NQV8 689 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 KLC4Q9NSK0 619 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 HACD3Q9P035 362 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 NFKBIL1Q9UBC1 381 aaPredicted RBP11.41□□□□□ -0.58
CDHR3-205ENST00000468143 LHX6Q9UPM6 363 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 DNAJC16Q9Y2G8 782 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 PKP3Q9Y446 797 aa11.41□□□□□ -0.58
CDHR3-205ENST00000468143 CCDC187A0A096LP49 1063 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 GLYATL1P3A0A0U1RQE8 302 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 TNFSF15O95150 251 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 CCDC175P0C221 793 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 TPH1P17752 444 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 MPSTP25325 297 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 CD1CP29017 333 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 PPM1FP49593 454 aaPredicted RBP11.4□□□□□ -0.58
CDHR3-205ENST00000468143 CCZ1BP86790 482 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 CCZ1P86791 482 aaPredicted RBP11.4□□□□□ -0.58
CDHR3-205ENST00000468143 TMPRSS15P98073 1019 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 TMEM115Q12893 351 aaPredicted RBP11.4□□□□□ -0.58
CDHR3-205ENST00000468143 NFATC2Q13469 925 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 SNX1Q13596 522 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 RPS6KA1Q15418 735 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 INSCQ1MX18 579 aa11.4□□□□□ -0.58
CDHR3-205ENST00000468143 PARP6Q2NL67 630 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms