RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 NUAK1O60285 661 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 CREG1O75629 220 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 AMPD1P23109 780 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 MMP13P45452 471 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 CDH6P55285 790 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 ERV3-1Q14264 604 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 MARC1Q5VT66 337 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 CHST15Q7LFX5 561 aaPredicted RBP12.04□□□□□ -0.48
UBR4-211ENST00000467272 ARRDC2Q8TBH0 407 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 FAM71BQ8TC56 605 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 SSC4DQ8WTU2 575 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 MAML1Q92585 1016 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 FATE1Q969F0 183 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 EID2BQ96D98 161 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 TDRD1Q9BXT4 1180 aaKnown RBP12.04□□□□□ -0.48
UBR4-211ENST00000467272 BRD8Q9H0E9 1235 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 HSD3B7Q9H2F3 369 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 ZWILCHQ9H900 591 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 ZNF624Q9P2J8 865 aaPredicted RBP12.04□□□□□ -0.48
UBR4-211ENST00000467272 EPHA6Q9UF33 1036 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 LIMA1Q9UHB6 759 aaKnown RBP12.04□□□□□ -0.48
UBR4-211ENST00000467272 ZNHIT2Q9UHR6 403 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 KCND3Q9UK17 655 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 KCNK6Q9Y257 313 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 PCDHGA9Q9Y5G4 932 aaKnown RBP12.04□□□□□ -0.48
UBR4-211ENST00000467272 GOLGA6CA6NDK9 693 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 GOLGA6BA6NDN3 693 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 LGALS16A8MUM7 142 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 C21orf140B9A014 251 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 INPP4BO15327 924 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 ATMINO43313 823 aaPredicted RBP12.03□□□□□ -0.48
UBR4-211ENST00000467272 PRPSAP2O60256 369 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 CEACAM4O75871 244 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 DNAJB5O75953 348 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 GOLGA6DP0CG33 693 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 ACP5P13686 325 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 SLC2A4P14672 509 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 BRAFP15056 766 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 GARSP41250 739 aaKnown RBP12.03□□□□□ -0.48
UBR4-211ENST00000467272 LEPRP48357 1165 aaKnown RBP12.03□□□□□ -0.48
UBR4-211ENST00000467272 COPB1P53618 953 aaKnown RBP12.03□□□□□ -0.48
UBR4-211ENST00000467272 RPL26P61254 145 aaKnown RBP12.03□□□□□ -0.48
UBR4-211ENST00000467272 FKBP15Q5T1M5 1219 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 FHL5Q5TD97 284 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 TMCO3Q6UWJ1 677 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 ZNF517Q6ZMY9 492 aaPredicted RBP12.03□□□□□ -0.48
UBR4-211ENST00000467272 TMEM26Q6ZUK4 368 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 AVL9Q8NBF6 648 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 CPT1CQ8TCG5 803 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 RAB33BQ9H082 229 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 CARD9Q9H257 536 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 AKIRIN1Q9H9L7 192 aaPredicted RBP12.03□□□□□ -0.48
UBR4-211ENST00000467272 GOLGA6AQ9NYA3 693 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 SLC23A2Q9UGH3 650 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 KLHL3Q9UH77 587 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 RPL26L1Q9UNX3 145 aaKnown RBP12.03□□□□□ -0.48
UBR4-211ENST00000467272 PCDHB3Q9Y5E6 796 aa12.03□□□□□ -0.48
UBR4-211ENST00000467272 AKAP9Q99996 3911 aa12.02□□□□□ -0.48
UBR4-211ENST00000467272 RGSL1A5PLK6 1076 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 KIF1CO43896 1103 aaKnown RBP12.02□□□□□ -0.49
UBR4-211ENST00000467272 SPAG6O75602 509 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 KIAA0754O94854 1291 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 AGFG2O95081 481 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 NDUFA10O95299 355 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 TIAF1O95411 115 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 CLDN7O95471 211 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 GZMAP12544 262 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 ZNF8P17098 575 aaPredicted RBP12.02□□□□□ -0.49
UBR4-211ENST00000467272 NELFEP18615 380 aaKnown RBP12.02□□□□□ -0.49
UBR4-211ENST00000467272 SLC19A1P41440 591 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 CAPZBP47756 277 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 SPINT3P49223 89 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 DNASE1L3Q13609 305 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 BECN1Q14457 450 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 UGT8Q16880 541 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 BOLA3Q53S33 107 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 TXNRD3NBQ6F5E7 133 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 PPP1R2P3Q6NXS1 205 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 TICAM1Q8IUC6 712 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 PAF1Q8N7H5 531 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 Q8NA96 180 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 NEK11Q8NG66 645 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 CT55Q8WUE5 264 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 SLC41A2Q96JW4 573 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 FCRL4Q96PJ5 515 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 OR6C1Q96RD1 312 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 STN1Q9H668 368 aaKnown RBP12.02□□□□□ -0.49
UBR4-211ENST00000467272 SLC40A1Q9NP59 571 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 LHX9Q9NQ69 397 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 FANCLQ9NW38 375 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 ATXN10Q9UBB4 475 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 CNOT8Q9UFF9 292 aaKnown RBP12.02□□□□□ -0.49
UBR4-211ENST00000467272 DNPEPQ9ULA0 475 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 PADI1Q9ULC6 663 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 MYO6Q9UM54 1294 aa12.02□□□□□ -0.49
UBR4-211ENST00000467272 PDZD2O15018 2839 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 TACC2O95359 2948 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 CDC14CA4D256 554 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 GPR89AB7ZAQ6 455 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms