RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 CBX2Q14781 532 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 GTF2IRD2BQ6EKJ0 949 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 NCCRP1Q6ZVX7 275 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 RAB44Q7Z6P3 723 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 GTF2IRD2Q86UP8 949 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 RIMKLAQ8IXN7 391 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 TSPEARQ8WU66 669 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 OSCP1Q8WVF1 389 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 TBATAQ96M53 351 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 RNF145Q96MT1 663 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 TDRD1Q9BXT4 1180 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 AIG1Q9NVV5 245 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 ERGIC3Q9Y282 383 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 MAGED1Q9Y5V3 778 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 J3KR12 359 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 PDHXO00330 501 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 LDB2O43679 373 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 BCL10O95999 233 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 CYBBP04839 570 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 KCNK10P57789 538 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 CLCQ05315 142 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC10A7Q0GE19 358 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 FXNQ16595 210 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 BRMS1LQ5PSV4 323 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 SFRP1Q8N474 314 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 CASP10Q92851 521 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 SEMA4BQ9NPR2 832 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 IKZF3Q9UKT9 509 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 PLXNB2O15031 1838 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 RSL1D1O76021 490 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 CLPXO76031 633 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 MOCS2O96007 188 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 ALDH2P05091 517 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 EEF1DP29692 281 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 CCR1P32246 355 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 CASP2P42575 452 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 RXRGP48443 463 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 ARSFP54793 590 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 ITKQ08881 620 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 CYP2A13Q16696 494 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 SIRPB2Q5JXA9 342 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 EGFLAMQ63HQ2 1017 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 TWF2Q6IBS0 349 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 NIPAL1Q6NVV3 410 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 IGFN1Q86VF2 1251 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 TMEM199Q8N511 208 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 GPN2Q9H9Y4 310 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 TMLHEQ9NVH6 421 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 TRNAU1APQ9NX07 287 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 GMIPQ9P107 970 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 NUDT5Q9UKK9 219 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 PSME2Q9UL46 239 aa12.91□□□□□ -0.34
PDZRN3-205ENST00000466780 C1orf232A0A0U1RR37 186 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 DYTNA2CJ06 578 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 CFAP99D6REC4 459 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 E9PAM4 449 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 TNPO2O14787 897 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 TREHO43280 583 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC2A3P11169 496 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 HTR1EP28566 365 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 IL12AP29459 219 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 PRDX3P30048 256 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 SUOXP51687 545 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 LCP2Q13094 533 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 ITGADQ13349 1161 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 RGS21Q2M5E4 152 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 BROXQ5VW32 411 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 SCIMPQ6UWF3 145 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 LEMD2Q8NC56 503 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 RHEBL1Q8TAI7 183 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC22A17Q8WUG5 538 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 PAAF1Q9BRP4 392 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 BDH2Q9BUT1 245 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 C1orf50Q9BV19 199 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 MIOSQ9NXC5 875 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 HS3ST4Q9Y661 456 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 CCDC154A6NI56 674 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 ABCB7O75027 752 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 GOT2P00505 430 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 ALPLP05186 524 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 ATXN1LP0C7T5 689 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 CRHBPP24387 322 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 HTR7P34969 479 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 ADAM17P78536 824 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 BFSP2Q13515 415 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 AASDHQ4L235 1098 aaPredicted RBP12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 TIGD2Q4W5G0 525 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 SPATA19Q7Z5L4 167 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 OR2T11Q8NH01 316 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 RAB2BQ8WUD1 216 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 TMBIM1Q969X1 311 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 ISG20Q96AZ6 181 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 LTB4R2Q9NPC1 389 aa12.9□□□□□ -0.34
PDZRN3-205ENST00000466780 VPS4BO75351 444 aa12.9□□□□□ -0.35
PDZRN3-205ENST00000466780 PRSS23O95084 383 aa12.9□□□□□ -0.35
PDZRN3-205ENST00000466780 F2P00734 622 aa12.9□□□□□ -0.35
PDZRN3-205ENST00000466780 HAPLN1P10915 354 aaPredicted RBP12.9□□□□□ -0.35
PDZRN3-205ENST00000466780 IL7RP16871 459 aa12.9□□□□□ -0.35
PDZRN3-205ENST00000466780 CDH3P22223 829 aa12.9□□□□□ -0.35
PDZRN3-205ENST00000466780 MRPL19P49406 292 aaKnown RBP12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms