RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 FAM122CQ6P4D5 195 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 SLC36A4Q6YBV0 504 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 C1QL2Q7Z5L3 287 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 FOXRED2Q8IWF2 684 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 CHERPQ8IWX8 916 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 THAP6Q8TBB0 222 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 FAM216AQ8WUB2 273 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 ORAI1Q96D31 301 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 GRAMD2BQ96HH9 432 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 TXNDC15Q96J42 360 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 ABHD1Q96SE0 405 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 SPATC1LQ9H0A9 340 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 OR10A4Q9H209 315 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 GIMAP2Q9UG22 337 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 AMACRQ9UHK6 382 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 ZNF148Q9UQR1 794 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 ZNF711Q9Y462 761 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 TMEM184BQ9Y519 407 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 ZNF521Q96K83 1311 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 ZNF541Q9H0D2 1346 aa4.35□□□□□ -1.71
CDC42BPA-211ENST00000466538 TMEM8BA6NDV4 472 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 A6NL46 340 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 HS3ST1O14792 307 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 RSL1D1O76021 490 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 TOMM40O96008 361 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 CRYABP02511 175 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 APOA4P06727 396 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 PRLRP16471 622 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 CDC25AP30304 524 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 APOBEC1P41238 236 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 CLCNKAP51800 687 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 UBXN2AP68543 259 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 SIRPAP78324 504 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 SPOCK1Q08629 439 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 MVPQ14764 893 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 DLG2Q15700 870 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 NSUN5P2Q63ZY6 315 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 PAPD4Q6PIY7 484 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 BRAT1Q6PJG6 821 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 CCDC190Q86UF4 302 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 AACSQ86V21 672 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 TDRD5Q8NAT2 981 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 SLC38A9Q8NBW4 561 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 TSPAN14Q8NG11 270 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 GSDMBQ8TAX9 411 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 DUSP19Q8WTR2 217 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 ZNF653Q96CK0 615 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 RADILQ96JH8 1075 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 AP1M1Q9BXS5 423 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 MCM9Q9NXL9 1143 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 BCCIPQ9P287 314 aaKnown RBP eCLIP4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 TINAGQ9UJW2 476 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 ANAPC2Q9UJX6 822 aa4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 ZHX1Q9UKY1 873 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 WBP11Q9Y2W2 641 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-211ENST00000466538 hDV102S1A0JD36 115 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 SOCS6O14544 535 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 KCNJ13O60928 360 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 TBX10O75333 385 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 IGHV4-30-4P0DP06 118 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 CDK4P11802 303 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 NR2F2P24468 414 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF81P51508 661 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 TMF1P82094 1093 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 SNTB1Q13884 538 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 SYT16Q17RD7 645 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 ERMARDQ5T6L9 678 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 C18orf63Q68DL7 685 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 FAM109BQ6ICB4 259 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 KRT80Q6KB66 452 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 INTS8Q75QN2 995 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF575Q86XF7 245 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 NRROSQ86YC3 692 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 GCSAMQ8N6F7 178 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 PCDH20Q8N6Y1 951 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 EMC1Q8N766 993 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 RND1Q92730 232 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 PTERQ96BW5 349 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 ARSGQ96EG1 525 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 PGAP3Q96FM1 320 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 CCDC106Q9BWC9 280 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 KCNK15Q9H427 330 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 EBF3Q9H4W6 596 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 DNAJC18Q9H819 358 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 ERVMER34-1Q9H9K5 563 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 SEBOXQ9HB31 216 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 CCDC177Q9NQR7 707 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 LARSQ9P2J5 1176 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 HACL1Q9UJ83 578 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 LOXL2Q9Y4K0 774 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 CCL27Q9Y4X3 112 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 INSL5Q9Y5Q6 135 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 TRPV2Q9Y5S1 764 aa4.33□□□□□ -1.72
CDC42BPA-211ENST00000466538 MYMKA6NI61 221 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 A8MXE2 369 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 MAGEB17A8MXT2 336 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 FAM90A26D6RGX4 464 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 H0YIN7 160 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms