RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 NAA25Q14CX7 972 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 GEN1Q17RS7 908 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 TMEM198Q66K66 360 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 ULK2Q8IYT8 1036 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 ZNF557Q8N988 423 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 LYSMD1Q96S90 227 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 HTATIP2Q9BUP3 242 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 CPEB1Q9BZB8 566 aaKnown RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 DERL2Q9GZP9 239 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 P2RY12Q9H244 342 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 TFB2MQ9H5Q4 396 aaKnown RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 NOP53Q9NZM5 478 aaKnown RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 IKZF3Q9UKT9 509 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 F8W8V4 182 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 SKAP2O75563 359 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 SUPT7LO94864 414 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 POP4O95707 220 aaKnown RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 CD1EP15812 388 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 BPIP17213 487 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 IMPDH1P20839 514 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 RAP1GDS1P52306 607 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 CRTC1Q6UUV9 634 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 FRMD7Q6ZUT3 714 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 CELF5Q8N6W0 485 aaKnown RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 SIDT2Q8NBJ9 832 aaKnown RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 RHEBL1Q8TAI7 183 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 GRIN3AQ8TCU5 1115 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 SORCS1Q8WY21 1168 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 LENG8Q96PV6 779 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 ATOH8Q96SQ7 321 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 EML4Q9HC35 981 aaKnown RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 UBXN8O00124 270 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 SLC9A3R1O14745 358 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-205ENST00000466192 VPS26AO75436 327 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 SNUPNO95149 360 aaKnown RBP18.12■□□□□ 0.49
COL9A3-205ENST00000466192 UGT2B4P06133 528 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 PYGLP06737 847 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 TPBGLP0DKB5 382 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 COX4I1P13073 169 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 MTHFD2P13995 350 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 TSPAN8P19075 237 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 CD9P21926 228 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 WEE1P30291 646 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 NRIP1P48552 1158 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 NFKB2Q00653 900 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 RAD51Q06609 339 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 DHCR24Q15392 516 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 TRIM68Q6AZZ1 485 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 CUZD1Q86UP6 607 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 SERPINA9Q86WD7 417 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 AHI1Q8N157 1196 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 CYB5D2Q8WUJ1 264 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 L3HYPDHQ96EM0 354 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 SCRN2Q96FV2 425 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 MARK4Q96L34 752 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 C19orf43Q9BQ61 176 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 GSTO2Q9H4Y5 243 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 ERVW-1Q9UQF0 538 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 PPIL1Q9Y3C6 166 aa18.12■□□□□ 0.49
COL9A3-205ENST00000466192 IQCF5A8MTL0 148 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 SMIM24O75264 130 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 ESR1P03372 595 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 POLR2EP19388 210 aaKnown RBP18.11■□□□□ 0.49
COL9A3-205ENST00000466192 VIPR2P41587 438 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 NFATC2Q13469 925 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 EML3Q32P44 896 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 ZNF678Q5SXM1 525 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 STK40Q8N2I9 435 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 VN1R2Q8NFZ6 395 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 OR2A12Q8NGT7 310 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 CD200R1Q8TD46 325 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 KCNJ9Q92806 393 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 KIAA1191Q96A73 305 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 MRGPRX3Q96LB0 322 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 CATSPER2Q96P56 530 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 SLC2A11Q9BYW1 496 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 ASB8Q9H765 288 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 EBF2Q9HAK2 575 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 DUS2Q9NX74 493 aaKnown RBP18.11■□□□□ 0.49
COL9A3-205ENST00000466192 TRPC5OSA6NMA1 111 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 TSPAN12O95859 305 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 CYP17A1P05093 508 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 CUL3Q13618 768 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 TCEAL5Q5H9L2 206 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 FAM219BQ5XKK7 198 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 CERS6Q6ZMG9 384 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 TPRG1Q6ZUI0 275 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 SNX20Q7Z614 316 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 ENDOVQ8N8Q3 282 aaKnown RBP18.11■□□□□ 0.49
COL9A3-205ENST00000466192 KCNV2Q8TDN2 545 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 NAT14Q8WUY8 206 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL9A3-205ENST00000466192 ZNF641Q96N77 438 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-205ENST00000466192 DCLRE1BQ9H816 532 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 SLC7A8Q9UHI5 535 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 TRMT6Q9UJA5 497 aaKnown RBP18.11■□□□□ 0.49
COL9A3-205ENST00000466192 FBXO10Q9UK96 956 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 APPL1Q9UKG1 709 aa18.11■□□□□ 0.49
COL9A3-205ENST00000466192 GLYATL1P3A0A0U1RQE8 302 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 UBFD1O14562 309 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms