RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PCBP4P57723 403 aaKnown RBP21.56■■□□□ 1.04
LIME1-203ENST00000465591 ZFP36L1Q07352 338 aaKnown RBP21.56■■□□□ 1.04
LIME1-203ENST00000465591 LRP8Q14114 963 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 AMZ1Q400G9 498 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 KHDC1Q4VXA5 237 aaKnown RBP21.56■■□□□ 1.04
LIME1-203ENST00000465591 ZNF569Q5MCW4 686 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 CCDC70Q6NSX1 233 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 LRRC69Q6ZNQ3 347 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 SLITRK4Q8IW52 837 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 TRAM1L1Q8N609 369 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 IPMKQ8NFU5 416 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 SEMA6CQ9H3T2 930 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 RSPH14Q9UHP6 348 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 PACSIN2Q9UNF0 486 aaPredicted RBP21.56■■□□□ 1.04
LIME1-203ENST00000465591 KCNK6Q9Y257 313 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 EFR3BQ9Y2G0 817 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 ADGRG1Q9Y653 693 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 LOC400499M0QZD8 3231 aa21.56■■□□□ 1.04
LIME1-203ENST00000465591 RHPN2P1A8MT19 583 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 NUAK1O60285 661 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 TNFSF15O95150 251 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 EPOP01588 193 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 ACP5P13686 325 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 RBMS1P29558 406 aaKnown RBP21.55■■□□□ 1.04
LIME1-203ENST00000465591 ALDH4A1P30038 563 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 TLE3Q04726 772 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 CCDC181Q5TID7 509 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 USP53Q70EK8 1073 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 RAB11FIP2Q7L804 512 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 ADGRG6Q86SQ4 1221 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 ZNF248Q8NDW4 579 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 SLC37A2Q8TED4 501 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 GLYATL1Q969I3 302 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 TMEM74Q96NL1 305 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 NUDT22Q9BRQ3 303 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 ZSCAN5AQ9BUG6 496 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 OR2AG1Q9H205 316 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 THSD1Q9NS62 852 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 IMPACTQ9P2X3 320 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 TBC1D29Q9UFV1 150 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 TRHDEQ9UKU6 1024 aa21.55■■□□□ 1.04
LIME1-203ENST00000465591 PLD2O14939 933 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 MTX2O75431 263 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 SLC25A14O95258 325 aaPredicted RBP21.54■■□□□ 1.04
LIME1-203ENST00000465591 CD1CP29017 333 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 UGT1A5P35504 534 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 EIF3EP60228 445 aaKnown RBP21.54■■□□□ 1.04
LIME1-203ENST00000465591 OLIG2Q13516 323 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 SLC1A5Q15758 541 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 NKAIN2Q5VXU1 208 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 ZNF574Q6ZN55 896 aaPredicted RBP21.54■■□□□ 1.04
LIME1-203ENST00000465591 ZNF761Q86XN6 746 aaPredicted RBP21.54■■□□□ 1.04
LIME1-203ENST00000465591 FBXO39Q8N4B4 442 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 GBA3Q9H227 469 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 CARD9Q9H257 536 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 RMI1Q9H9A7 625 aa21.54■■□□□ 1.04
LIME1-203ENST00000465591 A6NCN8 305 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 DDX3YO15523 660 aaKnown RBP21.53■■□□□ 1.04
LIME1-203ENST00000465591 GRID2O43424 1007 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 BUD23O43709 281 aaKnown RBP21.53■■□□□ 1.04
LIME1-203ENST00000465591 FTCDO95954 541 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 AGTP01019 485 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 RBP3P10745 1247 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 CA5AP35218 305 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 HMGCLP35914 325 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 CFHR1Q03591 330 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 MPP3Q13368 585 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 MAP9Q49MG5 647 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 CLEC14AQ86T13 490 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 SFRP1Q8N474 314 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 STRADBQ9C0K7 418 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 PRORYQ9H606 182 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 TRIM39Q9HCM9 518 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 RAD18Q9NS91 495 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 SLC23A2Q9UGH3 650 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 AMFRQ9UKV5 643 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 BPTFQ12830 3046 aa21.53■■□□□ 1.04
LIME1-203ENST00000465591 ZNF106Q9H2Y7 1883 aaKnown RBP21.52■■□□□ 1.04
LIME1-203ENST00000465591 GPR39O43194 453 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 CPNE6O95741 557 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 ITGA2BP08514 1039 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 ITIH1P19827 911 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 CSF2RBP32927 897 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 ETV5P41161 510 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 FASLGP48023 281 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 KIF5AQ12840 1032 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 PEX6Q13608 980 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 PTPRCAPQ14761 206 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 C16orf72Q14CZ0 275 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 ATP13A5Q4VNC0 1218 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 ANKRD20A2Q5SQ80 823 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.52■■□□□ 1.04
LIME1-203ENST00000465591 ANKRD20A1Q5TYW2 823 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 ANKRD20A3Q5VUR7 823 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 PDPK2PQ6A1A2 396 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 CRTC3Q6UUV7 619 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 PEX26Q7Z412 305 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 CDKL3Q8IVW4 592 aaPredicted RBP21.52■■□□□ 1.04
LIME1-203ENST00000465591 BLOC1S5Q8TDH9 187 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 BBC3Q96PG8 261 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms