RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 GRTP1Q5TC63 336 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 GKAP1Q5VSY0 366 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-215ENST00000465457 HHATQ5VTY9 493 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 RFWD3Q6PCD5 774 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 KDELC1Q6UW63 502 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 RANBP10Q6VN20 620 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 ADIPOR2Q86V24 386 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 TAX1BP1Q86VP1 789 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 CPXM2Q8N436 756 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 SPATA22Q8NHS9 363 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 WFDC5Q8TCV5 224 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 DENND1AQ8TEH3 1009 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 ZNF473Q8WTR7 871 aaKnown RBP13.81□□□□□ -0.2
HDAC6-215ENST00000465457 DDI1Q8WTU0 396 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 TADA1Q96BN2 335 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 MED8Q96G25 268 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 ZNF317Q96PQ6 595 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-215ENST00000465457 FAM107BQ9H098 131 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 ATP13A1Q9HD20 1204 aa13.81□□□□□ -0.2
HDAC6-215ENST00000465457 UBA2Q9UBT2 640 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-215ENST00000465457 ZCWPW2A0A1B0GU75 182 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 HEATR9A2RTY3 570 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 ERICH4A6NGS2 130 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 C10orf142B7Z368 130 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 TRIM49D1C9J1S8 452 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 TRIM38O00635 465 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 TIMM44O43615 452 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 DFNA5O60443 496 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 USP12O75317 370 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 ASMTLO95671 621 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 MT-CO3P00414 261 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 CDK4P11802 303 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 CKMT2P17540 419 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 HLA-DPA1P20036 260 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 SPRP35270 261 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-215ENST00000465457 CSRP3P50461 194 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 SGSHP51688 502 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 NXPH1P58417 271 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 GABREP78334 506 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 CRADDP78560 199 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 ITKQ08881 620 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 SLC10A7Q0GE19 358 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 DBN1Q16643 649 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 PROX2Q3B8N5 592 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 TTC31Q49AM3 519 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-215ENST00000465457 RALGPS1Q5JS13 557 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 TRMT10BQ6PF06 316 aaKnown RBP13.8□□□□□ -0.2
HDAC6-215ENST00000465457 PACS1Q6VY07 963 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 CIR1Q86X95 450 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-215ENST00000465457 C4orf33Q8N1A6 199 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 ZNF557Q8N988 423 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-215ENST00000465457 KCNE4Q8WWG9 221 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 PEX13Q92968 403 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 GRAMD1AQ96CP6 724 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 FEM1CQ96JP0 617 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 CABS1Q96KC9 395 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 MRGPRX2Q96LB1 330 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 PSKH2Q96QS6 385 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 MGME1Q9BQP7 344 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 CINPQ9BW66 212 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-215ENST00000465457 SGK2Q9HBY8 427 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 SMYD2Q9NRG4 433 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 TCAF1Q9Y4C2 921 aa13.8□□□□□ -0.2
HDAC6-215ENST00000465457 SPTAN1Q13813 2472 aaKnown RBP13.8□□□□□ -0.2
HDAC6-215ENST00000465457 A0A1W2PNU3 283 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-215ENST00000465457 A0A1W2PP55 124 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 A0A1W2PPM1 405 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 PMS2P1A4D2B8 440 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 CXorf49A8MYA2 514 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-215ENST00000465457 COPEO14579 308 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 ATP9BO43861 1147 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 PMPCBO75439 489 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 MT-CYBP00156 380 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-215ENST00000465457 FGF1P05230 155 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 MYF5P13349 255 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 CREB1P16220 341 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 CD38P28907 300 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 ACVRL1P37023 503 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 CCT5P48643 541 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 POLD2P49005 469 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 SEC24CP53992 1094 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 PPP2CBP62714 309 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 RPS24P62847 133 aaKnown RBP13.79□□□□□ -0.2
HDAC6-215ENST00000465457 PPP2CAP67775 309 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 VAC14Q08AM6 782 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 NFATC3Q12968 1075 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 PDK4Q16654 411 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 CERCAMQ5T4B2 595 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 BROXQ5VW32 411 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 DENND5AQ6IQ26 1287 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 KCNMB4Q86W47 210 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 TRIM42Q8IWZ5 723 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 LMNTD2Q8IXW0 634 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 CFAP52Q8N1V2 620 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 ANKS4BQ8N8V4 417 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 MGARPQ8TDB4 240 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 MYO19Q96H55 970 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 FAM167BQ9BTA0 163 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 ASCL3Q9NQ33 180 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms