RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ACSM2AQ08AH3 577 aa5.79□□□□□ -1.48
PTCD3-205ENST00000464541 PDE1CQ14123 709 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-205ENST00000464541 ACCSLQ4AC99 568 aa5.79□□□□□ -1.48
PTCD3-205ENST00000464541 ACSM2BQ68CK6 577 aa5.79□□□□□ -1.48
PTCD3-205ENST00000464541 FOXL2NBQ6ZUU3 175 aa5.79□□□□□ -1.48
PTCD3-205ENST00000464541 HIST3H2AQ7L7L0 130 aa5.79□□□□□ -1.48
PTCD3-205ENST00000464541 LMLNQ96KR4 655 aa5.79□□□□□ -1.48
PTCD3-205ENST00000464541 SYT17Q9BSW7 474 aa5.79□□□□□ -1.48
PTCD3-205ENST00000464541 COPG2Q9UBF2 871 aa5.79□□□□□ -1.48
PTCD3-205ENST00000464541 DOCK7Q96N67 2140 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 ASPDHA6ND91 283 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 ANKRD28O15084 1053 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 CDH1P12830 882 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 FUT6P51993 359 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 ZNF132P52740 706 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 GEMIN4P57678 1058 aaKnown RBP5.78□□□□□ -1.48
PTCD3-205ENST00000464541 PITX1P78337 314 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-205ENST00000464541 SREBF2Q12772 1141 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 AIMP2Q13155 320 aaKnown RBP5.78□□□□□ -1.48
PTCD3-205ENST00000464541 TMEM35AQ53FP2 167 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 C9orf50Q5SZB4 431 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 IRAK1BP1Q5VVH5 260 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 PMS2CLQ68D20 193 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 C9orf139Q6ZV77 190 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 OR5R1Q8NH85 324 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 CD101Q93033 1021 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 MOAP1Q96BY2 351 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 CMTM3Q96MX0 182 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 NEURL2Q9BR09 285 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 C1QTNF1Q9BXJ1 281 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 EPB41L5Q9HCM4 733 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 EIF2B3Q9NR50 452 aaKnown RBP5.78□□□□□ -1.48
PTCD3-205ENST00000464541 ZNF112Q9UJU3 913 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 PADI3Q9ULW8 664 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 DLGAP4Q9Y2H0 992 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 KLHL20Q9Y2M5 609 aa5.78□□□□□ -1.48
PTCD3-205ENST00000464541 TMEM184BQ9Y519 407 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-205ENST00000464541 FRMD3A2A2Y4 597 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 EIF4E1BA6NMX2 242 aaKnown RBP5.77□□□□□ -1.49
PTCD3-205ENST00000464541 SMAD9O15198 467 aaKnown RBP5.77□□□□□ -1.49
PTCD3-205ENST00000464541 ZBED4O75132 1171 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 ICAM1P05362 532 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 MYOD1P15172 320 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 ACADLP28330 430 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 TERF1P54274 439 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 GALCP54803 685 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 NAP1L1P55209 391 aaKnown RBP5.77□□□□□ -1.49
PTCD3-205ENST00000464541 CLDN20P56880 219 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 GTF2H2Q13888 395 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 ZSCAN23Q3MJ62 389 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 LRIF1Q5T3J3 769 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 GKAP1Q5VSY0 366 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-205ENST00000464541 GTF2H2CQ6P1K8 395 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 ASB18Q6ZVZ8 466 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 CUZD1Q86UP6 607 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 EPHX4Q8IUS5 362 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 TEX11Q8IYF3 940 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 MAB21L3Q8N8X9 362 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 IL17RCQ8NAC3 791 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 SPATA20Q8TB22 786 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 HES6Q96HZ4 224 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 EGLN2Q96KS0 407 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 TIGD1Q96MW7 591 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 LRRC1Q9BTT6 524 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 MAF1Q9H063 256 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 ABCF3Q9NUQ8 709 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 MTMR10Q9NXD2 777 aa5.77□□□□□ -1.49
PTCD3-205ENST00000464541 R3HDM2Q9Y2K5 976 aaKnown RBP5.77□□□□□ -1.49
PTCD3-205ENST00000464541 RUSC2Q8N2Y8 1516 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 CDRT15L2A8MXV6 281 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 BMPR1BO00238 502 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 WDR1O75083 606 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 SRPRAP08240 638 aaKnown RBP5.76□□□□□ -1.49
PTCD3-205ENST00000464541 RARGP13631 454 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 ZNF23P17027 643 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 ITGA2P17301 1181 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 POLR2CP19387 275 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-205ENST00000464541 ASTE1Q2TB18 679 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-205ENST00000464541 KRTCAP3Q53RY4 240 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 FAM76BQ5HYJ3 339 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 SDCCAG8Q86SQ7 713 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-205ENST00000464541 NR2C2APQ86WQ0 139 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 TMTC2Q8N394 836 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 METTL27Q8N6F8 245 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-205ENST00000464541 ACVR1CQ8NER5 493 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 OR8K5Q8NH50 307 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 HM13Q8TCT9 377 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 OR2A14Q96R47 310 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 UBA5Q9GZZ9 404 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 CSTL1Q9H114 145 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 PIGMQ9H3S5 423 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 DONSONQ9NYP3 566 aa5.76□□□□□ -1.49
PTCD3-205ENST00000464541 IFITM10A6NMD0 228 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 OGG1O15527 345 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 ZNHIT1O43257 154 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 BUD23O43709 281 aaKnown RBP5.75□□□□□ -1.49
PTCD3-205ENST00000464541 HS6ST1O60243 411 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 PTP4A3O75365 173 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 GPC4O75487 556 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 ZNF432O94892 652 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms