RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 RGSL1A5PLK6 1076 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.335e-16■■■■□ 25.2
HMGN1-210ENST00000464078 ACP5P13686 325 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
HMGN1-210ENST00000464078 CA4P22748 312 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 GARSP41250 739 aaKnown RBP17.09■□□□□ 0.33
HMGN1-210ENST00000464078 UBE2IP63279 158 aaKnown RBP17.09■□□□□ 0.33
HMGN1-210ENST00000464078 SLC25A11Q02978 314 aaKnown RBP17.09■□□□□ 0.33
HMGN1-210ENST00000464078 GALNT2Q10471 571 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 PIGHQ14442 188 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-210ENST00000464078 ASIC2Q16515 512 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 STX1AQ16623 288 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 ATP1A1-AS1Q5TC04 95 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 E4F1Q66K89 784 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-210ENST00000464078 CLEC17AQ6ZS10 378 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 PHYKPLQ8IUZ5 450 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 FAM71BQ8TC56 605 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 ULBP3Q9BZM4 244 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 ISCUQ9H1K1 167 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 CARD9Q9H257 536 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 KLHL3Q9UH77 587 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 TP53TG5Q9Y2B4 290 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 ADGRG1Q9Y653 693 aa17.09■□□□□ 0.33
HMGN1-210ENST00000464078 NBPF19A0A087WUL8 3843 aa17.08■□□□□ 0.33
HMGN1-210ENST00000464078 ITPR2Q14571 2701 aa17.08■□□□□ 0.33
HMGN1-210ENST00000464078 GOLGA6L3A6NEY3 463 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 FADS2P1A8MWK0 482 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 GPR89AB7ZAQ6 455 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 MKRN2OSH3BPM6 223 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 NUAK1O60285 661 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 CLDN7O95471 211 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 GPR89BP0CG08 455 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 F8A1P23610 371 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 IL4RP24394 825 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 MAPK9P45984 424 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 SPINT3P49223 89 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 TXNRD3NBQ6F5E7 133 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 C16orf46Q6P387 395 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 ATCAYQ86WG3 371 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 AOPEPQ8N6M6 819 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 ARRDC2Q8TBH0 407 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 C9orf72Q96LT7 481 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 TBC1D10AQ9BXI6 508 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 HAUS2Q9NVX0 235 aa17.08■□□□□ 0.32
HMGN1-210ENST00000464078 MRPS18BQ9Y676 258 aaKnown RBP17.08■□□□□ 0.32
HMGN1-210ENST00000464078 C1orf232A0A0U1RR37 186 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 MATN3O15232 486 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 MFSD11O43934 449 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 DLSTP36957 453 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 ZNF165P49910 485 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 GFERP55789 205 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 DSC2Q02487 901 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 ITKQ08881 620 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 IL11RAQ14626 422 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 TIGD7Q6NT04 549 aaPredicted RBP17.07■□□□□ 0.32
HMGN1-210ENST00000464078 TSGA13Q96PP4 275 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 PLEKHG4BQ96PX9 1271 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 FAM83DQ9H4H8 585 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 ZNF768Q9H5H4 540 aaKnown RBP17.07■□□□□ 0.32
HMGN1-210ENST00000464078 PCDH9Q9HC56 1237 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 PKD2L2Q9NZM6 624 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 OGFRQ9NZT2 677 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 MYO1AQ9UBC5 1043 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 POLHQ9Y253 713 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 CHKBQ9Y259 395 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 PCDHB3Q9Y5E6 796 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 PCDHGA6Q9Y5G7 932 aa17.07■□□□□ 0.32
HMGN1-210ENST00000464078 DOPEY1Q5JWR5 2465 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 GRID2O43424 1007 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 SNX2O60749 519 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 RFPL1O75677 317 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 RECKO95980 971 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 ZNF28P17035 718 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 XRCC1P18887 633 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-210ENST00000464078 PMS2P54278 862 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 PAFAH1B3Q15102 231 aaKnown RBP17.06■□□□□ 0.32
HMGN1-210ENST00000464078 SASS6Q6UVJ0 657 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 C6orf15Q6UXA7 325 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-210ENST00000464078 TMEM26Q6ZUK4 368 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 CCDC13Q8IYE1 715 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 LPCAT1Q8NF37 534 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 RTN4Q9NQC3 1192 aaKnown RBP17.06■□□□□ 0.32
HMGN1-210ENST00000464078 PRDM8Q9NQV8 689 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 NFKBIL1Q9UBC1 381 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-210ENST00000464078 KCND3Q9UK17 655 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 CROTQ9UKG9 612 aa17.06■□□□□ 0.32
HMGN1-210ENST00000464078 K7EM74 188 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 MTSS1O43312 755 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 CCNCP24863 283 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 CAPZBP47756 277 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 FOXM1Q08050 763 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 KLHL30Q0D2K2 578 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 KRT81Q14533 505 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 IFI16Q16666 785 aaKnown RBP17.05■□□□□ 0.32
HMGN1-210ENST00000464078 ANKRD20A8PQ5CZ79 823 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 NCBP2-AS2Q69YL0 99 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 PRSS42Q7Z5A4 293 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 TEX19Q8NA77 164 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 GALNT6Q8NCL4 622 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms