RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 CST8O60676 142 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 PRAMEF10O60809 474 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 EML2O95834 649 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 EPOP01588 193 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 THRAP10827 490 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 CD68P34810 354 aaPredicted RBP20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 NOP2P46087 812 aaKnown RBP20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 DYNLT1P63172 113 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 CFHR1Q03591 330 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 WASHC5Q12768 1159 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 TFDP3Q5H9I0 405 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 ZNF569Q5MCW4 686 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 C11orf63Q6NUN7 778 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 TMEM71Q6P5X7 295 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 SPATA22Q8NHS9 363 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 USP7Q93009 1102 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 CCDC74BQ96LY2 380 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 VAT1Q99536 393 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 KCNK4Q9NYG8 393 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 SEPT10Q9P0V9 454 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 ATXN10Q9UBB4 475 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 TBC1D29Q9UFV1 150 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 CFAP46Q8IYW2 2715 aa20.33■□□□□ 0.85
PDLIM4-205ENST00000463615 hCG_1818297A0A087WSY0 165 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 KIR2DS5A0A0G2JLQ3 304 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 A0A0G2JNG1 304 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 LOC285095A0A1B0GVY8 99 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 OR5K4A6NMS3 321 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 KIR2DS3K7RE56 304 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 GRID2O43424 1007 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 ZRANB2O95218 330 aaKnown RBP eCLIP20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 MT-CYBP00156 380 aaPredicted RBP20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 SLC2A4P14672 509 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 PECAM1P16284 738 aaPredicted RBP20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 CSF2RBP32927 897 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 KIR2DS5Q14953 304 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 CCDC70Q6NSX1 233 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 CHST15Q7LFX5 561 aaPredicted RBP20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 RCOR2Q8IZ40 523 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 AVL9Q8NBF6 648 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 GLYATL1Q969I3 302 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 SH3KBP1Q96B97 665 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 PLEKHG4BQ96PX9 1271 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 SPATA16Q9BXB7 569 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 TRIM5Q9C035 493 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 FOXJ2Q9P0K8 574 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 SAE1Q9UBE0 346 aaPredicted RBP20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 FAM153AQ9UHL3 310 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 SHOC2Q9UQ13 582 aa20.32■□□□□ 0.84
PDLIM4-205ENST00000463615 PRR19A6NJB7 356 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 PRB1P04280 392 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 F3P13726 295 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 ZNF8P17098 575 aaPredicted RBP20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 BPIP17213 487 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 HMGCLP35914 325 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 EPHA4P54764 986 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 ADCY2Q08462 1091 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 PPP2R5EQ16537 467 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 PCSK7Q16549 785 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 TMEM164Q5U3C3 297 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 WDR74Q6RFH5 385 aaPredicted RBP20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 KDELC1Q6UW63 502 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 AGBL5Q8NDL9 886 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 CALR3Q96L12 384 aaKnown RBP20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 VPS35Q96QK1 796 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 FCRL5Q96RD9 977 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 TAAR9Q96RI9 348 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 SLC38A3Q99624 504 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 GPR63Q9BZJ6 419 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 TRABDQ9H4I3 376 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 PRKAB1Q9Y478 270 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 PCDHA13Q9Y5I0 950 aa20.31■□□□□ 0.84
PDLIM4-205ENST00000463615 COL6A6A6NMZ7 2263 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 HELZ2Q9BYK8 2649 aaKnown RBP20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 HACD1B0YJ81 288 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 SLC25A14O95258 325 aaPredicted RBP20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 PIRTP0C851 137 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 FGF3P11487 239 aaPredicted RBP20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 CCL4P13236 92 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 ACP5P13686 325 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 TNNT1P13805 278 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 FECHP22830 423 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 MAPK10P53779 464 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 HHEXQ03014 270 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 TGIF1Q15583 401 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 TAF1BQ53T94 588 aaPredicted RBP20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 FAM182AQ5T1J6 154 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 NKAIN2Q5VXU1 208 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 KDELC2Q7Z4H8 507 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 ADGRG6Q86SQ4 1221 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 SLC9B2Q86UD5 537 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 PHYKPLQ8IUZ5 450 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 ZNF843Q8N446 348 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 OR10G6Q8NH81 332 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 P3H4Q92791 437 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 RBM41Q96IZ5 413 aaKnown RBP20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 DDA1Q9BW61 102 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 EPB41L1Q9H4G0 881 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 STN1Q9H668 368 aaKnown RBP20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 UCK1Q9HA47 277 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms