RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 DGKGP49619 791 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 SLC12A2P55011 1212 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 TAS2R39P59534 338 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 NSUN2Q08J23 767 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 CTBP1Q13363 440 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 SMAD1Q15797 465 aaKnown RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 FAM83EQ2M2I3 478 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 MUM1Q2TAK8 710 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ARL13AQ5H913 290 aaPredicted RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 TECRLQ5HYJ1 363 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 AGAP9Q5VTM2 703 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 C1orf146Q5VVC0 180 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ZNF470Q6ECI4 717 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 GRAMD4Q6IC98 578 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ZC3H14Q6PJT7 736 aaKnown RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ACAD11Q709F0 780 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 CEP97Q8IW35 865 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 LSMEM2Q8N112 164 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 CAMKK1Q8N5S9 505 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 RP9Q8TA86 221 aaKnown RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 MAPK15Q8TD08 544 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 NRG4Q8WWG1 115 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ACDQ96AP0 544 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 FEM1CQ96JP0 617 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 MAELQ96JY0 434 aaKnown RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 SP110Q9HB58 689 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 C2orf42Q9NWW7 574 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ZSCAN32Q9NX65 697 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 NCKIPSDQ9NZQ3 722 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 CPSF2Q9P2I0 782 aaKnown RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 XPR1Q9UBH6 696 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 SLC2A6Q9UGQ3 507 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 PRPF19Q9UMS4 504 aaKnown RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 PCDHGA2Q9Y5H1 932 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 RIF1Q5UIP0 2472 aaKnown RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ZFHX2Q9C0A1 2572 aaPredicted RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 VPS13AQ96RL7 3174 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 CCDC163A0A0D9SF12 145 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 RGSL1A5PLK6 1076 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 TRPC5OSA6NMA1 111 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ANPEPP15144 967 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 NCF2P19878 526 aaPredicted RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 HLA-DPA1P20036 260 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ITGAXP20702 1163 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 MPSTP25325 297 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 NAGLUP54802 743 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 MTTPP55157 894 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 MRPS35P82673 323 aaKnown RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 SLC10A7Q0GE19 358 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 DLG1Q12959 904 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 SERINC3Q13530 473 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ALFQ53S48 1182 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 C2orf27AQ580R0 203 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 VWA5B1Q5TIE3 1220 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 NADSYN1Q6IA69 706 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 IRGCQ6NXR0 463 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 FBXL22Q6P050 247 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 TSSK4Q6SA08 328 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 SFTPA1Q8IWL2 248 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 IL17RCQ8NAC3 791 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 OR13J1Q8NGT2 312 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 GPR150Q8NGU9 434 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ARRDC2Q8TBH0 407 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 BHMTQ93088 406 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 FAM136AQ96C01 138 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 NXNL1Q96CM4 212 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ELMO2Q96JJ3 720 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 UBXN10Q96LJ8 280 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 OR52B2Q96RD2 323 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 OMDQ99983 421 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 NT5MQ9NPB1 228 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 IGSF5Q9NSI5 407 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 NDE1Q9NXR1 346 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ANTXRLA6NF34 631 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 PRRT4C9JH25 899 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 J3KR12 359 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 MAP3K7O43318 606 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 TSPAN3O60637 253 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 PRAMEF11O60813 436 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 RAMP2O60895 175 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 LILRB5O75023 590 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 CNTN5O94779 1100 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 FGF1P05230 155 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 CHRNGP07510 517 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 LTA4HP09960 611 aaKnown RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 HNRNPLP14866 589 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 HOXD9P28356 352 aaPredicted RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 SLC6A4P31645 630 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 TIE1P35590 1138 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 PPARGP37231 505 aaPredicted RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 CD86P42081 329 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 CHRNA4P43681 627 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 SLC25A3Q00325 362 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 SEPT6Q14141 434 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 RFTN1Q14699 578 aaPredicted RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 POLD3Q15054 466 aaPredicted RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 ACAP2Q15057 778 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 LSM12Q3MHD2 195 aaKnown RBP9.86□□□□□ -0.83
PTPRD-207ENST00000463477 KLC3Q6P597 504 aa9.86□□□□□ -0.83
PTPRD-207ENST00000463477 FRMD7Q6ZUT3 714 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms