RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 AVL9Q8NBF6 648 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 C9orf43Q8TAL5 461 aaPredicted RBP19.59■□□□□ 0.73
VARS-221ENST00000463184 FAM71BQ8TC56 605 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 FATE1Q969F0 183 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 LYSMD1Q96S90 227 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 DNAJC7Q99615 494 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 RBM22Q9NW64 420 aaKnown RBP eCLIP19.59■□□□□ 0.73
VARS-221ENST00000463184 CNOT6Q9ULM6 557 aaKnown RBP19.59■□□□□ 0.73
VARS-221ENST00000463184 PRKAB1Q9Y478 270 aa19.59■□□□□ 0.73
VARS-221ENST00000463184 PCYT1BQ9Y5K3 369 aaPredicted RBP19.59■□□□□ 0.73
VARS-221ENST00000463184 OAS3Q9Y6K5 1087 aaKnown RBP19.59■□□□□ 0.73
VARS-221ENST00000463184 KIR2DS5A0A0G2JLQ3 304 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 A0A0G2JNG1 304 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 OR5K4A6NMS3 321 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 AKR1B15C9JRZ8 316 aaPredicted RBP19.58■□□□□ 0.72
VARS-221ENST00000463184 KIR2DS3K7RE56 304 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 MFAP3LO75121 409 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 STK17BO94768 372 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 PRLP01236 227 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 F3P13726 295 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 CCNCP24863 283 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 NOP2P46087 812 aaKnown RBP19.58■□□□□ 0.72
VARS-221ENST00000463184 MMRN1Q13201 1228 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 IHHQ14623 411 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 KIR2DS5Q14953 304 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 CRTC2Q53ET0 693 aaPredicted RBP19.58■□□□□ 0.72
VARS-221ENST00000463184 TDRD12Q587J7 1177 aaKnown RBP19.58■□□□□ 0.72
VARS-221ENST00000463184 TIPARPQ7Z3E1 657 aaKnown RBP19.58■□□□□ 0.72
VARS-221ENST00000463184 KDELC2Q7Z4H8 507 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 ZNHIT6Q9NWK9 470 aaKnown RBP19.58■□□□□ 0.72
VARS-221ENST00000463184 KCNK6Q9Y257 313 aa19.58■□□□□ 0.72
VARS-221ENST00000463184 PTPN13Q12923 2485 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 RGSL1A5PLK6 1076 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 A6NCN8 305 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 POLR1CO15160 346 aaPredicted RBP19.57■□□□□ 0.72
VARS-221ENST00000463184 MFSD11O43934 449 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 PRKAR1AP10644 381 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 SPINT3P49223 89 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 UBAP2LQ14157 1087 aaKnown RBP19.57■□□□□ 0.72
VARS-221ENST00000463184 PAFAH1B3Q15102 231 aaKnown RBP19.57■□□□□ 0.72
VARS-221ENST00000463184 IFI16Q16666 785 aaKnown RBP19.57■□□□□ 0.72
VARS-221ENST00000463184 HENMT1Q5T8I9 393 aaKnown RBP19.57■□□□□ 0.72
VARS-221ENST00000463184 PLXDC1Q8IUK5 500 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 UNC5BQ8IZJ1 945 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.57■□□□□ 0.72
VARS-221ENST00000463184 ARRDC2Q8TBH0 407 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 APOBEC4Q8WW27 367 aaKnown RBP19.57■□□□□ 0.72
VARS-221ENST00000463184 BTBD6Q96KE9 485 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 TSGA13Q96PP4 275 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 WDR24Q96S15 920 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 FAM83DQ9H4H8 585 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 PCDH9Q9HC56 1237 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 APMAPQ9HDC9 416 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 ABHD10Q9NUJ1 306 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 PKD2L2Q9NZM6 624 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 ANAPC7Q9UJX3 599 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 TTLL3Q9Y4R7 772 aa19.57■□□□□ 0.72
VARS-221ENST00000463184 C1orf232A0A0U1RR37 186 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 MYO1FO00160 1098 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 SNX2O60749 519 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 DLGAP3O95886 979 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 CD48P09326 243 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 ACP5P13686 325 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 CDC25BP30305 580 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 MAPK9P45984 424 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 FOXK1P85037 733 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 MAP7Q14244 749 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 HADHQ16836 314 aaKnown RBP19.56■□□□□ 0.72
VARS-221ENST00000463184 ANKRD20A8PQ5CZ79 823 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 NCBP2-AS2Q69YL0 99 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 ESX1Q8N693 406 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 LPCAT1Q8NF37 534 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 CCHCR1Q8TD31 782 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 STARD8Q92502 1023 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 NUP85Q9BW27 656 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 THAP2Q9H0W7 228 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 CARD9Q9H257 536 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 ZNF71Q9NQZ8 489 aaPredicted RBP19.56■□□□□ 0.72
VARS-221ENST00000463184 ANKMY1Q9P2S6 941 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 CPNE7Q9UBL6 633 aa19.56■□□□□ 0.72
VARS-221ENST00000463184 GOLGA6L3A6NEY3 463 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 FADS2P1A8MWK0 482 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 GRID2O43424 1007 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 NUAK1O60285 661 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 ANKRD34CP0C6C1 535 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 TCN2P20062 427 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 SSR1P43307 286 aaKnown RBP19.55■□□□□ 0.72
VARS-221ENST00000463184 ARSEP51690 589 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 CLCNKAP51800 687 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 NIPAL4Q0D2K0 466 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 SEPT6Q14141 434 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 DPYSL3Q14195 570 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 DEFB109BQ30KR1 87 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 PHYKPLQ8IUZ5 450 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 ABHD17AQ96GS6 310 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 MLPHQ9BV36 600 aaPredicted RBP19.55■□□□□ 0.72
VARS-221ENST00000463184 UCK1Q9HA47 277 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 KLHL3Q9UH77 587 aa19.55■□□□□ 0.72
VARS-221ENST00000463184 MN1Q10571 1320 aaPredicted RBP19.54■□□□□ 0.72
VARS-221ENST00000463184 LILRA5A6NI73 299 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms