RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 ZNF669Q96BR6 464 aaPredicted RBP19.05■□□□□ 0.64
XPA-202ENST00000462523 NUSAP1Q9BXS6 441 aaKnown RBP19.05■□□□□ 0.64
XPA-202ENST00000462523 ASB8Q9H765 288 aa19.05■□□□□ 0.64
XPA-202ENST00000462523 IL21RQ9HBE5 538 aa19.05■□□□□ 0.64
XPA-202ENST00000462523 IL1RAPL1Q9NZN1 696 aa19.05■□□□□ 0.64
XPA-202ENST00000462523 CHMP2BQ9UQN3 213 aa19.05■□□□□ 0.64
XPA-202ENST00000462523 TMEM98Q9Y2Y6 226 aa19.05■□□□□ 0.64
XPA-202ENST00000462523 PCYT1BQ9Y5K3 369 aaPredicted RBP19.05■□□□□ 0.64
XPA-202ENST00000462523 RPS6KL1Q9Y6S9 549 aa19.05■□□□□ 0.64
XPA-202ENST00000462523 TRBV5-4A0A0C4DH59 114 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 CACNB4O00305 520 aaPredicted RBP19.04■□□□□ 0.64
XPA-202ENST00000462523 MAGEC1O60732 1142 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 MTX2O75431 263 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 USP1O94782 785 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 SLC25A14O95258 325 aaPredicted RBP19.04■□□□□ 0.64
XPA-202ENST00000462523 CEACAM5P06731 702 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 POLD2P49005 469 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 SEMA3AQ14563 771 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 SHBQ15464 509 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 SMAD1Q15797 465 aaKnown RBP19.04■□□□□ 0.64
XPA-202ENST00000462523 ZNF542PQ5EBM4 170 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 ENPP7Q6UWV6 458 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 SNX20Q7Z614 316 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 ANKMY2Q8IV38 441 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 OR56A4Q8NGH8 313 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 IFT81Q8WYA0 676 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 OR1E3Q8WZA6 343 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 SKA1Q96BD8 255 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 LRRC39Q96DD0 335 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 PDXPQ96GD0 296 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 SGSM3Q96HU1 749 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 WDR92Q96MX6 357 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 MRPL40Q9NQ50 206 aaKnown RBP19.04■□□□□ 0.64
XPA-202ENST00000462523 SLC17A4Q9Y2C5 497 aa19.04■□□□□ 0.64
XPA-202ENST00000462523 VAPBO95292 243 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 PGAM1P18669 254 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 PRAMEP78395 509 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 PTK2BQ14289 1009 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 CRYMQ14894 314 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 ZNF423Q2M1K9 1284 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 ALG11Q2TAA5 492 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 HLA-BQ31612 363 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 ZRANB3Q5FWF4 1079 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 GPRC6AQ5T6X5 926 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 KIAA0930Q6ICG6 404 aaPredicted RBP19.03■□□□□ 0.64
XPA-202ENST00000462523 DOK6Q6PKX4 331 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 AFTPHQ6ULP2 937 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 PARGQ86W56 976 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 PHYKPLQ8IUZ5 450 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 ZBED8Q8IZ13 594 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 UNC5BQ8IZJ1 945 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 FBXO36Q8NEA4 188 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 DDHD1Q8NEL9 900 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 OR6P1Q8NGX9 317 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 OR4L1Q8NH43 312 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 TSACCQ96A04 125 aaPredicted RBP19.03■□□□□ 0.64
XPA-202ENST00000462523 TCEAL2Q9H3H9 227 aaPredicted RBP19.03■□□□□ 0.64
XPA-202ENST00000462523 ANKZF1Q9H8Y5 726 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 ERVMER34-1Q9H9K5 563 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 MARCH4Q9P2E8 410 aaPredicted RBP19.03■□□□□ 0.64
XPA-202ENST00000462523 SLC30A1Q9Y6M5 507 aa19.03■□□□□ 0.64
XPA-202ENST00000462523 GOLGA8KD6RF30 607 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 GOLGA8TH3BQL2 631 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 ITGALP20701 1170 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 HTR1BP28222 390 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 CACNG1Q06432 222 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 UNC5AQ6ZN44 842 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 PRR23CQ6ZRP0 262 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 CENPUQ71F23 418 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 ADGRG6Q86SQ4 1221 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 NXPE1Q8N323 547 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 ZDHHC5Q9C0B5 715 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 PHACTR1Q9C0D0 580 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 SAYSD1Q9NPB0 183 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 ATXN10Q9UBB4 475 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.02■□□□□ 0.64
XPA-202ENST00000462523 FAM169AQ9Y6X4 670 aa19.02■□□□□ 0.64
XPA-202ENST00000462523 RIF1Q5UIP0 2472 aaKnown RBP19.02■□□□□ 0.63
XPA-202ENST00000462523 EIF3HO15372 352 aaKnown RBP eCLIP19.02■□□□□ 0.63
XPA-202ENST00000462523 DNAJC6O75061 913 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 POLBP06746 335 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 SYPP08247 313 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 ACRV1P26436 265 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 B4GALNT1Q00973 533 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 CUL1Q13616 776 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 GPR33Q49SQ1 333 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 STEAP4Q687X5 459 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 SERPINA9Q86WD7 417 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 RBFAQ8N0V3 343 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 NAT14Q8WUY8 206 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 SCARF2Q96GP6 870 aaPredicted RBP19.02■□□□□ 0.63
XPA-202ENST00000462523 ELF4Q99607 663 aaPredicted RBP19.02■□□□□ 0.63
XPA-202ENST00000462523 GTPBP2Q9BX10 602 aaKnown RBP19.02■□□□□ 0.63
XPA-202ENST00000462523 FAM129AQ9BZQ8 928 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 GAREM1Q9H706 876 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 TRIM39Q9HCM9 518 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 DNAJC28Q9NX36 388 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 KLQ9UEF7 1012 aa19.02■□□□□ 0.63
XPA-202ENST00000462523 ZC3H7BQ9UGR2 993 aaKnown RBP19.02■□□□□ 0.63
XPA-202ENST00000462523 CFAP54Q96N23 3096 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms