RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 GLT1D1Q96MS3 346 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 TRIM15Q9C019 465 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 SARS2Q9NP81 518 aaKnown RBP16.82■□□□□ 0.28
ACTB-207ENST00000462494 TMEM161AQ9NX61 479 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 ABCD2Q9UBJ2 740 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 DHRS12A0PJE2 317 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 FXYD1O00168 92 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 HTRA2O43464 458 aaPredicted RBP16.82■□□□□ 0.28
ACTB-207ENST00000462494 GJB5O95377 273 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 MATN4O95460 622 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 PYGLP06737 847 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 ZDHHC11BP0C7U3 371 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 ATF6P18850 670 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 SLC6A2P23975 617 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 MC4RP32245 332 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 SLC11A1P49279 550 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 CDH4P55283 916 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 TXNL4AP83876 142 aaKnown RBP16.82■□□□□ 0.28
ACTB-207ENST00000462494 PLOD1Q02809 727 aaPredicted RBP16.82■□□□□ 0.28
ACTB-207ENST00000462494 FUT11Q495W5 492 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 ZRANB3Q5FWF4 1079 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 UGT3A1Q6NUS8 523 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 FUT10Q6P4F1 479 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 BLOC1S3Q6QNY0 202 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 PRSS55Q6UWB4 352 aaPredicted RBP16.82■□□□□ 0.28
ACTB-207ENST00000462494 TAS1R1Q7RTX1 841 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 ERMP1Q7Z2K6 904 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 SYVN1Q86TM6 617 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 TSPAN14Q8NG11 270 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 ZUFSPQ96AP4 578 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 TEX37Q96LM6 180 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 BIRC8Q96P09 236 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 HGH1Q9BTY7 390 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 ARMC1Q9NVT9 282 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 MARCH5Q9NX47 278 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 FKBPLQ9UIM3 349 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 TRMT6Q9UJA5 497 aaKnown RBP16.82■□□□□ 0.28
ACTB-207ENST00000462494 TSR3Q9UJK0 312 aaKnown RBP16.82■□□□□ 0.28
ACTB-207ENST00000462494 AGO1Q9UL18 857 aaKnown RBP16.82■□□□□ 0.28
ACTB-207ENST00000462494 PCDHB7Q9Y5E2 793 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 ANKRD12Q6UB98 2062 aa16.82■□□□□ 0.28
ACTB-207ENST00000462494 KDELR3O43731 214 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 TSPAN3O60637 253 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 VPS26AO75436 327 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 PRLP01236 227 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 CYBBP04839 570 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 RHOCP08134 193 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 RPS17P08708 135 aaKnown RBP16.81■□□□□ 0.28
ACTB-207ENST00000462494 ARL1P40616 181 aaPredicted RBP16.81■□□□□ 0.28
ACTB-207ENST00000462494 SGSHP51688 502 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 NR1H2P55055 460 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 KCNK10P57789 538 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 NFYCQ13952 458 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 INPP5AQ14642 412 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 C16orf59Q7L2K0 433 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 CARM1Q86X55 608 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 NKAPQ8N5F7 415 aaKnown RBP16.81■□□□□ 0.28
ACTB-207ENST00000462494 TRIML2Q8N7C3 387 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 ANKFN1Q8N957 763 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 EEF1AKMT1Q8WVE0 214 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 TCF12Q99081 682 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 ACOX2Q99424 681 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 CCT7Q99832 543 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 C1orf50Q9BV19 199 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 TDRD1Q9BXT4 1180 aaKnown RBP16.81■□□□□ 0.28
ACTB-207ENST00000462494 CCM2LQ9NUG4 571 aaPredicted RBP16.81■□□□□ 0.28
ACTB-207ENST00000462494 RAI2Q9Y5P3 530 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 GPR45Q9Y5Y3 372 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 MOXD2PA6NHM9 499 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 PDLIM1O00151 329 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 PLOD2O00469 737 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 GIPC1O14908 333 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 SNX2O60749 519 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 VPS4BO75351 444 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 CHEK2O96017 543 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 LPOP22079 712 aaPredicted RBP16.81■□□□□ 0.28
ACTB-207ENST00000462494 IL10P22301 178 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 CES1P23141 567 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 PSMA4P25789 261 aaKnown RBP16.81■□□□□ 0.28
ACTB-207ENST00000462494 USP41Q3LFD5 358 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 B3GNT6Q6ZMB0 384 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.81■□□□□ 0.281e-15■■■■■ 133.4
ACTB-207ENST00000462494 LINGO1Q96FE5 620 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 CD274Q9NZQ7 290 aa16.81■□□□□ 0.28
ACTB-207ENST00000462494 OAS3Q9Y6K5 1087 aaKnown RBP16.81■□□□□ 0.28
ACTB-207ENST00000462494 ANKRD36A6QL64 1941 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 ARHGAP10A1A4S6 786 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 H3BNC9 293 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 H6PDO95479 791 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 IRF1P10914 325 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 BMP2P12643 396 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 PKMP14618 531 aaKnown RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 CLCN2P51788 898 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 ZNF177Q13360 481 aaPredicted RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 RABL3Q5HYI8 236 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 HABP4Q5JVS0 413 aaKnown RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 LINGO4Q6UY18 593 aa16.8■□□□□ 0.28
ACTB-207ENST00000462494 TMEM173Q86WV6 379 aaPredicted RBP16.8■□□□□ 0.28
ACTB-207ENST00000462494 CBR4Q8N4T8 237 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms