RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 EFR3BQ9Y2G0 817 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 PRKAB1Q9Y478 270 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 CACNA1GO43497 2377 aa10.08□□□□□ -0.8
SF3A3-204ENST00000462258 LOC285095A0A1B0GVY8 99 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 CDRT15L2A8MXV6 281 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 GOLGA6L6A8MZA4 724 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 TMX2-CTNND1H3BSU7 103 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 PLD2O14939 933 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 AURKAO14965 403 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 ZW10O43264 779 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 NUAK1O60285 661 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 TNFSF15O95150 251 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 CPNE6O95741 557 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 ITGA2BP08514 1039 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 HGFP14210 728 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 BPIP17213 487 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 HLA-DPA1P20036 260 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 RBL1P28749 1068 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 CETN2P41208 172 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 CHRNA4P43681 627 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 OR1D5P58170 312 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 B4GALNT1Q00973 533 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 TLE3Q04726 772 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 MPP3Q13368 585 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 AMZ1Q400G9 498 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 SIRPB2Q5JXA9 342 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 PHF19Q5T6S3 580 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 ITPRIPL1Q6GPH6 555 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 RAB11FIP2Q7L804 512 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 PID1Q7Z2X4 250 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 TMPRSS9Q7Z410 1059 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 GLT6D1Q7Z4J2 308 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 CLEC14AQ86T13 490 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 SLITRK4Q8IW52 837 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 SPACA3Q8IXA5 215 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 FBXO39Q8N4B4 442 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 SLC25A41Q8N5S1 370 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 SLC37A2Q8TED4 501 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 ALG3Q92685 438 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 GLYATL1Q969I3 302 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 NAF1Q96HR8 494 aaKnown RBP10.07□□□□□ -0.8
SF3A3-204ENST00000462258 SLC46A1Q96NT5 459 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 PLEKHG4BQ96PX9 1271 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 FAM118BQ9BPY3 351 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 FERMT1Q9BQL6 677 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 FSD1LQ9BXM9 530 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 OR2AG1Q9H205 316 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 CARD9Q9H257 536 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 TRABDQ9H4I3 376 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 C10orf88Q9H8K7 445 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 ARFGAP3Q9NP61 516 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 ATXN10Q9UBB4 475 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 TRIM10Q9UDY6 481 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 ZNHIT2Q9UHR6 403 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 TRHDEQ9UKU6 1024 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 KCNK6Q9Y257 313 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 LOXL2Q9Y4K0 774 aa10.07□□□□□ -0.8
SF3A3-204ENST00000462258 A0A0U1RQJ8 604 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 GPR89AB7ZAQ6 455 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 GRID2O43424 1007 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 STK10O94804 968 aaKnown RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 TJP3O95049 919 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 SLC25A14O95258 325 aaPredicted RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 EML2O95834 649 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 EPOP01588 193 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 PTMAP06454 111 aaKnown RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 JMJD7P0C870 316 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 GPR89BP0CG08 455 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 RBP3P10745 1247 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 ZNF8P17098 575 aaPredicted RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 ALDH4A1P30038 563 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 CSF2RBP32927 897 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 UGT1A5P35504 534 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 HMGCLP35914 325 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 SPAM1P38567 509 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 GPR3P46089 330 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 FASLGP48023 281 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 EIF3EP60228 445 aaKnown RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 KIF5AQ12840 1032 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 SLC1A5Q15758 541 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 CLPPQ16740 277 aaPredicted RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 ZNF648Q5T619 568 aaPredicted RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 AADACL2Q6P093 401 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 CRTC3Q6UUV7 619 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 PEX26Q7Z412 305 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 SYCE1Q8N0S2 351 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 SFRP1Q8N474 314 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 TTC30BQ8N4P2 665 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 UBL4BQ8N7F7 174 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 BLOC1S5Q8TDH9 187 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 FCRL3Q96P31 734 aaPredicted RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 VPS35Q96QK1 796 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 GORASP1Q9BQQ3 440 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 NUDT22Q9BRQ3 303 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 FICDQ9BVA6 458 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 STN1Q9H668 368 aaKnown RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 RDH14Q9HBH5 336 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 BPIFA1Q9NP55 256 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 HACD3Q9P035 362 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms