RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ACP5P13686 325 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 CYLC1P35663 651 aaPredicted RBP18.75■□□□□ 0.59
VARS-220ENST00000461874 ETV5P41161 510 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 MARCKSL1P49006 195 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 ZNF569Q5MCW4 686 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 TRAM1L1Q8N609 369 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 PANX2Q96RD6 677 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 OR2AG1Q9H205 316 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 TRIM39Q9HCM9 518 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 LUC7LQ9NQ29 371 aaKnown RBP18.75■□□□□ 0.59
VARS-220ENST00000461874 AKAP7Q9P0M2 348 aaPredicted RBP18.75■□□□□ 0.59
VARS-220ENST00000461874 TBC1D29Q9UFV1 150 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 FAM153AQ9UHL3 310 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 KCNK6Q9Y257 313 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.75■□□□□ 0.59
VARS-220ENST00000461874 SPO11Q9Y5K1 396 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 ADGRG1Q9Y653 693 aa18.75■□□□□ 0.59
VARS-220ENST00000461874 PRAMEF33A0A0G2JMD5 474 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 LOC285095A0A1B0GVY8 99 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 A6NCN8 305 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 K7ENP7 123 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 ERVH48-1M5A8F1 160 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 GRID2O43424 1007 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 PRAMEF10O60809 474 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 SLC25A14O95258 325 aaPredicted RBP18.74■□□□□ 0.59
VARS-220ENST00000461874 SLC4A1P02730 911 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 ZNF8P17098 575 aaPredicted RBP18.74■□□□□ 0.59
VARS-220ENST00000461874 BPIP17213 487 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 ZNF75DP51815 510 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 LIMK2P53671 638 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 GPLD1P80108 840 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 RHDQ02161 417 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 CFHR1Q03591 330 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 TRA2AQ13595 282 aaKnown RBP eCLIP18.74■□□□□ 0.59
VARS-220ENST00000461874 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.74■□□□□ 0.59
VARS-220ENST00000461874 ZNF648Q5T619 568 aaPredicted RBP18.74■□□□□ 0.59
VARS-220ENST00000461874 PDPK2PQ6A1A2 396 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 IYDQ6PHW0 289 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 INO80CQ6PI98 192 aaPredicted RBP18.74■□□□□ 0.59
VARS-220ENST00000461874 PCSK4Q6UW60 755 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 KDELC1Q6UW63 502 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 ZC3H18Q86VM9 953 aaKnown RBP18.74■□□□□ 0.59
VARS-220ENST00000461874 CCDC50Q8IVM0 306 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 OR4D9Q8NGE8 314 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 KRT35Q92764 455 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 USP7Q93009 1102 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 GLYATL1Q969I3 302 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 RBM41Q96IZ5 413 aaKnown RBP18.74■□□□□ 0.59
VARS-220ENST00000461874 CCDC74BQ96LY2 380 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 CCNL2Q96S94 520 aaPredicted RBP18.74■□□□□ 0.59
VARS-220ENST00000461874 DPYSL5Q9BPU6 564 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 B3GNT4Q9C0J1 378 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 ARFGAP3Q9NP61 516 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 SARS2Q9NP81 518 aaKnown RBP18.74■□□□□ 0.59
VARS-220ENST00000461874 KALRNO60229 2985 aa18.74■□□□□ 0.59
VARS-220ENST00000461874 GPR89AB7ZAQ6 455 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 AURKAO14965 403 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 EPOP01588 193 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 PRB1P04280 392 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 GPR89BP0CG08 455 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 NFKB1P19838 968 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 CSF2RBP32927 897 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 MAPK10P53779 464 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 WNT3AP56704 352 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 TGIF1Q15583 401 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 PPP2R5EQ16537 467 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 CCDC81Q6ZN84 652 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 BBS12Q6ZW61 710 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 ADGRG6Q86SQ4 1221 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 DAAM2Q86T65 1068 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 ZNF761Q86XN6 746 aaPredicted RBP18.73■□□□□ 0.59
VARS-220ENST00000461874 RCBTB1Q8NDN9 531 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 HTR3CQ8WXA8 447 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 HAUS1Q96CS2 278 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 MRFAP1L1Q96HT8 127 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 QKIQ96PU8 341 aaKnown RBP eCLIP18.73■□□□□ 0.59
VARS-220ENST00000461874 VAT1Q99536 393 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 SLC38A3Q99624 504 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 HERPUD2Q9BSE4 406 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 FOXJ2Q9P0K8 574 aa18.73■□□□□ 0.59
VARS-220ENST00000461874 KLHL8Q9P2G9 620 aaPredicted RBP18.73■□□□□ 0.59
VARS-220ENST00000461874 EPN1Q9Y6I3 576 aaPredicted RBP18.73■□□□□ 0.59
VARS-220ENST00000461874 RCCD1A6NED2 376 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 SOWAHDA6NJG2 315 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 HACD1B0YJ81 288 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 C9orf172C9J069 976 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 CHUKO15111 745 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 EFSO43281 561 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 SNX2O60749 519 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 NDUFA10O95299 355 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 THRAP10827 490 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 LIPCP11150 499 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 CCL4P13236 92 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 SLC2A4P14672 509 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 FECHP22830 423 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 CLCNKAP51800 687 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 HHEXQ03014 270 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 TMEM71Q6P5X7 295 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 PID1Q7Z2X4 250 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 TMTC1Q8IUR5 882 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms