RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CNGB3Q9NQW8 809 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 MTMR10Q9NXD2 777 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 TRMT1Q9NXH9 659 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 MCM9Q9NXL9 1143 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 STK26Q9P289 416 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE2DQ9UEU5 116 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 DDX25Q9UHL0 483 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 AGO1Q9UL18 857 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 SQORQ9Y6N5 450 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 GPR75-ASB3A0A0A6YYF3 556 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 A0A0U1RQJ8 604 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 C1orf226A1L170 272 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 MAGEB17A8MXT2 336 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 H3BQ06 376 aaPredicted RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 CLGNO14967 610 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 KCNN4O15554 427 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 HSPA12AO43301 675 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 RGS14O43566 566 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 PLRG1O43660 514 aaKnown RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 BUD23O43709 281 aaKnown RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 PRAMEF11O60813 436 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 RFPL2O75678 378 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 SERPINI2O75830 405 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 CH25HO95992 272 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 TOMM40O96008 361 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 EGFP01133 1207 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 RPN1P04843 607 aaKnown RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 ICAM1P05362 532 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 TUBBP07437 444 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 CCDC175P0C221 793 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 PRLRP16471 622 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 TNFRSF1BP20333 461 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 MMP14P50281 582 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 MXI1P50539 228 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF81P51508 661 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 PPATQ06203 517 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 ALCAMQ13740 583 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 KLF9Q13886 244 aaPredicted RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 KRT33BQ14525 404 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 HNF4GQ14541 408 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 NR1D2Q14995 579 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 HLFQ16534 295 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 DECR1Q16698 335 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 AMZ1Q400G9 498 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 FNBP1LQ5T0N5 605 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 CST9LP1Q5W188 147 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 NUGGCQ68CJ6 796 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 TYW3Q6IPR3 259 aaKnown RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 INTS8Q75QN2 995 aaKnown RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 HAUS6Q7Z4H7 955 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 ANKRD23Q86SG2 305 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 ZC3HC1Q86WB0 502 aaKnown RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 MAML2Q8IZL2 1156 aaPredicted RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 C9orf106Q8NAJ2 232 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF548Q8NEK5 533 aaPredicted RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 OR10S1Q8NGN2 331 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 OR14A16Q8NHC5 309 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 OIT3Q8WWZ8 545 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 RMDN1Q96DB5 314 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 MTBPQ96DY7 904 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 PGAP3Q96FM1 320 aaPredicted RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 EGLN2Q96KS0 407 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 SPATA17Q96L03 361 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 RAB3IPQ96QF0 476 aaPredicted RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 ABHD1Q96SE0 405 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 KLHL4Q9C0H6 718 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 DNAJC18Q9H819 358 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 PCDH9Q9HC56 1237 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 PIH1D3Q9NQM4 214 aaKnown RBP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 PFDN4Q9NQP4 134 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 SH3GLB2Q9NR46 395 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 BCCIPQ9P287 314 aaKnown RBP eCLIP3.03□□□□□ -1.92
HDAC6-212ENST00000461608 PLAGL1Q9UM63 463 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 CCL27Q9Y4X3 112 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 TRPV2Q9Y5S1 764 aa3.03□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF541Q9H0D2 1346 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 TMEM8BA6NDV4 472 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 H0YIN7 160 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 I6L893 689 aaPredicted RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 NDUFS4O43181 175 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 ZIC3O60481 467 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 OAZ2O95190 189 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 GGPS1O95749 300 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 FYNP06241 537 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 HOXC6P09630 235 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 IGHV4-30-4P0DP06 118 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 G6PDP11413 515 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 PSG1P11464 419 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 SRCP12931 536 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 SCG2P13521 617 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 HOXB2P14652 356 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 NR2F2P24468 414 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 BDKRB2P30411 391 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 PIGAP37287 484 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 EIF2S3P41091 472 aaKnown RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 HNRNPH2P55795 449 aaKnown RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 PSMC6P62333 389 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 TMF1P82094 1093 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 GPS2Q13227 327 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 RABEP1Q15276 862 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms