RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 KHSRPQ92945 711 aaKnown RBP eCLIP14.37□□□□□ -0.111e-7■■■□□ 17.3
NCL-207ENST00000461347 RERGLQ9H628 205 aa14.37□□□□□ -0.11
NCL-207ENST00000461347 CD320Q9NPF0 282 aa14.37□□□□□ -0.11
NCL-207ENST00000461347 PCDHGA7Q9Y5G6 932 aa14.37□□□□□ -0.11
NCL-207ENST00000461347 HEMK1Q9Y5R4 338 aaPredicted RBP14.37□□□□□ -0.11
NCL-207ENST00000461347 A0A0G2JLL6 359 aaPredicted RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 LRRC14BA6NHZ5 514 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 J3KR12 359 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 GSNP06396 782 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 POU1F1P28069 291 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 SLC5A2P31639 672 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 CPSF6Q16630 551 aaKnown RBP eCLIP14.36□□□□□ -0.112e-17■■□□□ 12.7
NCL-207ENST00000461347 AFTPHQ6ULP2 937 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 PRRT2Q7Z6L0 340 aaPredicted RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 SYTL1Q8IYJ3 562 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 C2CD4AQ8NCU7 369 aaPredicted RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 ZNF540Q8NDQ6 660 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 SPPL2AQ8TCT8 520 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 EPS8L2Q9H6S3 715 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 RBMX2Q9Y388 322 aaKnown RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 NUP205Q92621 2012 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 ULK1O75385 1050 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 CNPP09543 421 aaKnown RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 HALP42357 657 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 ZNF621Q6ZSS3 439 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 C16orf59Q7L2K0 433 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 OR10A6Q8NH74 314 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 CDK15Q96Q40 435 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 OLFM1Q99784 485 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 APOL4Q9BPW4 351 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 CXCL16Q9H2A7 254 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 GMPPBQ9Y5P6 360 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 ZNF646O15015 1829 aaPredicted RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 ZSCAN9O15535 394 aaPredicted RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 KRT75O95678 551 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 UMPSP11172 480 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 PKMP14618 531 aaKnown RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 ALOX15P16050 662 aaPredicted RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 ZNF7P17097 686 aaPredicted RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 ALOX12P18054 663 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 CD52P31358 61 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 ARRB2P32121 409 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 MC4RP32245 332 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 MAD2L1Q13257 205 aaPredicted RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 CDH18Q13634 790 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 GRB7Q14451 532 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 FAM171A1Q5VUB5 890 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 CARNMT1Q8N4J0 409 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 RPL10LQ96L21 214 aaKnown RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 NSUN5Q96P11 429 aaKnown RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 SLC27A5Q9Y2P5 690 aa14.36□□□□□ -0.11
NCL-207ENST00000461347 TNPO3Q9Y5L0 923 aaKnown RBP14.36□□□□□ -0.11
NCL-207ENST00000461347 SNAP29O95721 258 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 CAPN1P07384 714 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 RECQLP46063 649 aaPredicted RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 ZNF789Q5FWF6 425 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 MON1AQ86VX9 555 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 SLC15A3Q8IY34 581 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 PACRGLQ8N7B6 248 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 ARRDC4Q8NCT1 418 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 OR9Q1Q8NGQ5 310 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 SLC47A1Q96FL8 570 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 PLEKHA8Q96JA3 519 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 OR52E6Q96RD3 313 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 C8orf4Q9NR00 106 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 PRSS51A0A1B0GVH4 220 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 ZNF37AP17032 561 aaPredicted RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 RPL9P32969 192 aaKnown RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 GGT5P36269 586 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 TTPAP49638 278 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 MRPS6P82932 125 aaKnown RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 CSTF3Q12996 717 aaKnown RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 ZNF846Q147U1 533 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 MFSD14CQ5VZR4 134 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 CPNE9Q8IYJ1 553 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 TMEM132CQ8N3T6 1108 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 SVOPQ8N4V2 548 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 VPS37AQ8NEZ2 397 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 HPS1Q92902 700 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 ABHD8Q96I13 439 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 PPP3R2Q96LZ3 170 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 GALPQ9UBC7 116 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 C7orf72A4D263 438 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 LRATO95237 230 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 SPATA31D3P0C874 917 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 LPOP22079 712 aaPredicted RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 HOXA11P31270 313 aaPredicted RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 IDH2P48735 452 aaKnown RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 UFM1P61960 85 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 CCDC85BQ15834 202 aaPredicted RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 ZNF549Q6P9A3 640 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 SPATA31D4Q6ZUB0 917 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 SMYD1Q8NB12 490 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 ATAD1Q8NBU5 361 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 SELENOMQ8WWX9 145 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 IRGQQ8WZA9 623 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 ZBED3Q96IU2 234 aaPredicted RBP14.35□□□□□ -0.11
NCL-207ENST00000461347 R3HDMLQ9H3Y0 253 aa14.35□□□□□ -0.11
NCL-207ENST00000461347 RASSF1Q9NS23 344 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms