RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 A4D1N5 150 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 WIPF3A6NGB9 483 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 INO80B-WBP1J3KQ70 363 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 DDX39AO00148 427 aaKnown RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 SLC22A3O75751 556 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CELF2O95319 508 aaKnown RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 ICAM1P05362 532 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CYC1P08574 325 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 PRLRP16471 622 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ZNF81P51508 661 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ARSEP51690 589 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CDH13P55290 713 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 PROK1P58294 105 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 KRTAP10-11P60412 298 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 SCN1BQ07699 218 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 C17orf67Q0P5P2 114 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 COASYQ13057 564 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 PTK6Q13882 451 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ZNF268Q14587 947 aaPredicted RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 LPIN1Q14693 890 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CBWD6Q4V339 395 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ZRANB3Q5FWF4 1079 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 EARS2Q5JPH6 523 aaKnown RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 CBWD3Q5JTY5 395 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ISM2Q6H9L7 571 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 DHRS7BQ6IAN0 325 aaPredicted RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 NCAPH2Q6IBW4 605 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ANKRD54Q6NXT1 300 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 TMEM71Q6P5X7 295 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 OTOAQ7RTW8 1153 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 HAUS6Q7Z4H7 955 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ADCK2Q7Z695 626 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CENPVQ7Z7K6 275 aaPredicted RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 LDB1Q86U70 411 aaPredicted RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 ADIPOR2Q86V24 386 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 FAM217AQ8IXS0 508 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ZNF619Q8N2I2 560 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 GALNT16Q8N428 558 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 TEX9Q8N6V9 391 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 SCCPDHQ8NBX0 429 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 SEMA6DQ8NFY4 1073 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 TSPAN14Q8NG11 270 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 OR10S1Q8NGN2 331 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CEP76Q8TAP6 659 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 EXOC4Q96A65 974 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 NXNL1Q96CM4 212 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CCDC43Q96MW1 224 aaKnown RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 ZNF570Q96NI8 536 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 DDOQ99489 341 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 FERMT1Q9BQL6 677 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 MGME1Q9BQP7 344 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 SH2D3AQ9BRG2 576 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 MMADHCQ9H3L0 296 aaPredicted RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 CNOT10Q9H9A5 744 aaKnown RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 EPB41L5Q9HCM4 733 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 MKKSQ9NPJ1 570 aaPredicted RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 NRIP3Q9NQ35 241 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ADPRHL2Q9NX46 363 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 TAS2R14Q9NYV8 317 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 RRBP1Q9P2E9 1410 aaKnown RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 LARSQ9P2J5 1176 aaKnown RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 SLC4A4Q9Y6R1 1079 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 WDR97A6NE52 1622 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ARHGEF40Q8TER5 1519 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 RAPGEF2Q9Y4G8 1499 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CPED1A4D0V7 1026 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 LINC01548A6NM66 108 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 KCNK5O95279 499 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 MMP3P08254 477 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 VPREB1P12018 145 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 GJA1P17302 382 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ACHEP22303 614 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 HSPA4P34932 840 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 TCF7P36402 384 aaPredicted RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 EIF2S3P41091 472 aaKnown RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 BMXP51813 675 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ZNF131P52739 623 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CAPZA1P52907 286 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 PPP2R2BQ00005 443 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 HSF1Q00613 529 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 SPOCK1Q08629 439 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 STIM1Q13586 685 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ZNF273Q14593 569 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 PROSER3Q2NL68 480 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 LEXMQ3ZCV2 418 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 MIDNQ504T8 468 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 PARP10Q53GL7 1025 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 NHSL2Q5HYW2 709 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 KRT39Q6A163 491 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ZNF813Q6ZN06 617 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 FAM57BQ71RH2 274 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 MTSS1LQ765P7 747 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 CEP57Q86XR8 500 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 MB21D2Q8IYB1 491 aaPredicted RBP2.96□□□□□ -1.94
HPS3-203ENST00000460822 ZNF595Q8IYB9 648 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 RBFAQ8N0V3 343 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 SIX6OS1Q8N1H7 587 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 ARL6IP6Q8N6S5 226 aa2.96□□□□□ -1.94
HPS3-203ENST00000460822 SLC4A11Q8NBS3 891 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms