RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 C16orf96A6NNT2 1141 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 MGEA5O60502 916 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 SNAP91O60641 907 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 CKBP12277 381 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 DGKAP23743 735 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 ADRM1Q16186 407 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 MAPKAPK3Q16644 382 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 IL23RQ5VWK5 629 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 MED8Q96G25 268 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 CDK15Q96Q40 435 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 KCNA7Q96RP8 456 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 DYRK4Q9NR20 520 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 MARCH4Q9P2E8 410 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-204ENST00000460696 ZNF711Q9Y462 761 aa11.57□□□□□ -0.56
NPHP4-204ENST00000460696 A0A1B0GVM2 712 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 TCAF2A6NFQ2 919 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 RGS14O43566 566 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 CNPP09543 421 aaKnown RBP11.56□□□□□ -0.56
NPHP4-204ENST00000460696 NCK1P16333 377 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 CES1P23141 567 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 HSPA7P48741 367 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 XIAPP98170 497 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 CTC1Q2NKJ3 1217 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 PM20D1Q6GTS8 502 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 GCNT7Q6ZNI0 430 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 ITIH5Q86UX2 942 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 CPSF7Q8N684 471 aaKnown RBP11.56□□□□□ -0.56
NPHP4-204ENST00000460696 OSCP1Q8WVF1 389 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 RPL10LQ96L21 214 aaKnown RBP11.56□□□□□ -0.56
NPHP4-204ENST00000460696 IL12RB2Q99665 862 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 MFSD1Q9H3U5 465 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 TMEM161AQ9NX61 479 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 GALPQ9UBC7 116 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 SLC25A13Q9UJS0 675 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 BLOC1S6Q9UL45 172 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 POLR3HQ9Y535 204 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-204ENST00000460696 CDC7O00311 574 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 SLC25A14O95258 325 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-204ENST00000460696 GABRR2P28476 465 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 SCN1AP35498 2009 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 MTTPP55157 894 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 ZNF33AQ06730 810 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 ADGRE1Q14246 886 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 ADCK2Q7Z695 626 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 HORMAD1Q86X24 394 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 TCF12Q99081 682 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 OLFM1Q99784 485 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 SPATA16Q9BXB7 569 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 GPR62Q9BZJ7 368 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 TNKS2Q9H2K2 1166 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 COQ10BQ9H8M1 238 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 ZFYVE1Q9HBF4 777 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 INVSQ9Y283 1065 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 GNG14A0A1W2PPG7 69 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 CCDC189A1A4V9 331 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 PTGES3LE9PB15 166 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 ENPP3O14638 875 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 MAP3K13O43283 966 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 AHCYL1O43865 530 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 EPB42P16452 691 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 CDH4P55283 916 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 USP46P62068 366 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 IRF5Q13568 498 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 AP5B1Q2VPB7 878 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 GRAMD4Q6IC98 578 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 SCD5Q86SK9 330 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 ARL14EPQ8N8R7 260 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-204ENST00000460696 FEM1CQ96JP0 617 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 CLDND1Q9NY35 253 aa11.56□□□□□ -0.56
NPHP4-204ENST00000460696 LRRC14BA6NHZ5 514 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 TTC36A6NLP5 189 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 CAPN14A8MX76 684 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 CAPN1P07384 714 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 S100A3P33764 101 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 HERVK_113P63132 956 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 PFKPQ01813 784 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 ROR2Q01974 943 aaKnown RBP11.55□□□□□ -0.56
NPHP4-204ENST00000460696 LRRC26Q2I0M4 334 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 ZNF284Q2VY69 593 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 TLDC1Q6P9B6 456 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 SATL1Q86VE3 508 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 ZDHHC13Q8IUH4 622 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 ZNF276Q8N554 614 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 VPS37AQ8NEZ2 397 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 OR2T34Q8NGX1 318 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 OR2T3Q8NH03 318 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 SNRNP27Q8WVK2 155 aaKnown RBP11.55□□□□□ -0.56
NPHP4-204ENST00000460696 PKP2Q99959 881 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 ERVK-6Q9BXR3 956 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 MRPL17Q9NRX2 175 aaKnown RBP11.55□□□□□ -0.56
NPHP4-204ENST00000460696 ADAMTS6Q9UKP5 1117 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 NRXN2Q9P2S2 1712 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 IQCF5A8MTL0 148 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 SDHDO14521 159 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 LRATO95237 230 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 PRAMEF1O95521 474 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 IL1BP01584 269 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 HNRNPCP07910 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
NPHP4-204ENST00000460696 ANXA5P08758 320 aa11.55□□□□□ -0.56
NPHP4-204ENST00000460696 MAGEA3P43357 314 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms