RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 POLG2Q9UHN1 485 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 RPS6KA6Q9UK32 745 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 TTLL3Q9Y4R7 772 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 ATXN2Q99700 1313 aaKnown RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 GOLGA6L9A6NEM1 432 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 FAM90A26D6RGX4 464 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 H3BQ06 376 aaPredicted RBP3.37□□□□□ -1.87
RFC4-211ENST00000460408 SH2B2O14492 632 aaPredicted RBP3.37□□□□□ -1.87
RFC4-211ENST00000460408 SMAD6O43541 496 aaKnown RBP3.37□□□□□ -1.87
RFC4-211ENST00000460408 KRT86O43790 486 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 KCNJ13O60928 360 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 RFPL2O75678 378 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 CENPBP07199 599 aaPredicted RBP3.37□□□□□ -1.87
RFC4-211ENST00000460408 SRCP12931 536 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 MMP9P14780 707 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 TRIM21P19474 475 aaKnown RBP3.37□□□□□ -1.87
RFC4-211ENST00000460408 RRM1P23921 792 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 MT3P25713 68 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 NNMTP40261 264 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 NRIP1P48552 1158 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 MMP14P50281 582 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 HTR6P50406 440 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 HSD17B4P51659 736 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 CLCNKAP51800 687 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 NUCB1Q02818 461 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 EGR4Q05215 589 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 CXCL9Q07325 125 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 FOXM1Q08050 763 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 HYAL1Q12794 435 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 KRT81Q14533 505 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 CTF1Q16619 201 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 NSUN5P2Q63ZY6 315 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 BRAT1Q6PJG6 821 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 ADGRA1Q86SQ6 560 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 PRPF39Q86UA1 669 aaKnown RBP3.37□□□□□ -1.87
RFC4-211ENST00000460408 AACSQ86V21 672 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 FJX1Q86VR8 437 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 MCEMP1Q8IX19 187 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 SCYL3Q8IZE3 742 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 OR8H2Q8N162 312 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 PGBD5Q8N414 524 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 ZNF114Q8NC26 417 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 OR1J2Q8NGS2 313 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 ORAI1Q96D31 301 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 SCMH1Q96GD3 660 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 CEP295NLQ96MC4 621 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 CSF3RQ99062 836 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 TEX12Q9BXU0 123 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 IL25Q9H293 177 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 HRH4Q9H3N8 390 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 PCDH9Q9HC56 1237 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 GIMAP4Q9NUV9 329 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 TRMT1Q9NXH9 659 aaKnown RBP3.37□□□□□ -1.87
RFC4-211ENST00000460408 MCM9Q9NXL9 1143 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 STK39Q9UEW8 545 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 TMEM184BQ9Y519 407 aaPredicted RBP3.37□□□□□ -1.87
RFC4-211ENST00000460408 ZNF644Q9H582 1327 aaPredicted RBP3.37□□□□□ -1.87
RFC4-211ENST00000460408 SCRIBQ14160 1630 aa3.37□□□□□ -1.87
RFC4-211ENST00000460408 PDS5BQ9NTI5 1447 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 LNP1A1A4G5 178 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 TMEM8BA6NDV4 472 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 GLOD5A6NK44 160 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 PRSS44E7EML9 344 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 ADAMDEC1O15204 470 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 P4HA2O15460 535 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 KCNN4O15554 427 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 SPINT2O43291 252 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 CSPG5O95196 566 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 KCNK5O95279 499 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 UGT1A1P22309 533 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 CDC25AP30304 524 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 MSH2P43246 934 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 TAS2R38P59533 333 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 DDR1Q08345 913 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 TRAF2Q12933 501 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 CDC16Q13042 620 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 MAD2L1Q13257 205 aaPredicted RBP3.36□□□□□ -1.87
RFC4-211ENST00000460408 NTRK2Q16620 822 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 KRTAP27-1Q3LI81 207 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 XKR9Q5GH70 373 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 DCST1Q5T197 706 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 CFAP58Q5T655 872 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 GARNL3Q5VVW2 1013 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 KRT79Q5XKE5 535 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 WDR73Q6P4I2 378 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 PAPD4Q6PIY7 484 aaKnown RBP3.36□□□□□ -1.87
RFC4-211ENST00000460408 Q6ZTC4 211 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 KRT74Q7RTS7 529 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 EPHX4Q8IUS5 362 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 FBXL14Q8N1E6 418 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 ZBTB8BQ8NAP8 495 aaPredicted RBP3.36□□□□□ -1.87
RFC4-211ENST00000460408 SLC38A9Q8NBW4 561 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 OR5R1Q8NH85 324 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 HM13Q8TCT9 377 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 ELP5Q8TE02 316 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 PRPF31Q8WWY3 499 aaKnown RBP3.36□□□□□ -1.87
RFC4-211ENST00000460408 JAKMIP2Q96AA8 810 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 DACH2Q96NX9 599 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 CTAGE1Q96RT6 745 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms