RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 ACP1P24666 158 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 PLOD1Q02809 727 aaPredicted RBP10.6□□□□□ -0.71
UBR4-208ENST00000459947 RNF187Q5TA31 235 aaPredicted RBP10.6□□□□□ -0.71
UBR4-208ENST00000459947 TTC27Q6P3X3 843 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 LRRC6Q86X45 466 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 RBM12BQ8IXT5 1001 aaKnown RBP10.6□□□□□ -0.71
UBR4-208ENST00000459947 EID2Q8N6I1 236 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 ARL10Q8N8L6 244 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 ASB8Q9H765 288 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 IL26Q9NPH9 171 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 FSCN3Q9NQT6 498 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 ZDHHC3Q9NYG2 299 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 XIRP2A4UGR9 3374 aa10.6□□□□□ -0.71
UBR4-208ENST00000459947 GRID2O43424 1007 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 LDB2O43679 373 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 RFPL3O75679 317 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 PRAMEP78395 509 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 MSLNQ13421 630 aaPredicted RBP10.59□□□□□ -0.71
UBR4-208ENST00000459947 SPARCL1Q14515 664 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 CHRNA6Q15825 494 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 PROX2Q3B8N5 592 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 BOCQ9BWV1 1114 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 PHACTR1Q9C0D0 580 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 EPB41L1Q9H4G0 881 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 RXFP3Q9NSD7 469 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 NEU2Q9Y3R4 380 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 TMEM131Q92545 1883 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 SDR42E2A6NKP2 422 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 TTC4O95801 387 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 CKMT1AP12532 417 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 AKT1P31749 480 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 GNPDA1P46926 289 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 PYCR3Q53H96 274 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 PPM1JQ5JR12 505 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 OGFOD3Q6PK18 319 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 GALNT15Q8N3T1 639 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 BEND7Q8N7W2 519 aaPredicted RBP10.59□□□□□ -0.71
UBR4-208ENST00000459947 SNF8Q96H20 258 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 COPS8Q99627 209 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 SOX13Q9UN79 622 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 LRP4O75096 1905 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 GOLGA8CPA6NN73 597 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 AGAP14A8MT82 685 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 K7ESM1 405 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 ZNF185O15231 689 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 CALCOCO2Q13137 446 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 BCL7AQ4VC05 210 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 JAMLQ86YT9 394 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 NXPE1Q8N323 547 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 CALML6Q8TD86 181 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 KIFC1Q9BW19 673 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 DDX47Q9H0S4 455 aaKnown RBP10.59□□□□□ -0.71
UBR4-208ENST00000459947 FKBPLQ9UIM3 349 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 CNOT6Q9ULM6 557 aaKnown RBP10.59□□□□□ -0.71
UBR4-208ENST00000459947 SUFUQ9UMX1 484 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 TRBV5-4A0A0C4DH59 114 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 FADS2P1A8MWK0 482 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 CHUKO15111 745 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 INPP4BO15327 924 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 USP12O75317 370 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 MC4RP32245 332 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 NFATC2Q13469 925 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 BIRC2Q13490 618 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 POU6F1Q14863 301 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 KIAA0930Q6ICG6 404 aaPredicted RBP10.59□□□□□ -0.71
UBR4-208ENST00000459947 FAM151BQ6UXP7 276 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 WASH2PQ6VEQ5 465 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 OR2I1PQ8NGU4 316 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 TSACCQ96A04 125 aaPredicted RBP10.59□□□□□ -0.71
UBR4-208ENST00000459947 CDKN2AIPNLQ96HQ2 116 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 TCF12Q99081 682 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 WASH6PQ9NQA3 447 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 GPSM3Q9Y4H4 160 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 ARL5AQ9Y689 179 aa10.59□□□□□ -0.71
UBR4-208ENST00000459947 KIR2DS5A0A0G2JLQ3 304 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 A0A0G2JNG1 304 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 TMEM202A6NGA9 273 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 H3BMM5 538 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 KIR2DS3K7RE56 304 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 EIF3HO15372 352 aaKnown RBP eCLIP10.58□□□□□ -0.722e-11■■■□□ 17.1
UBR4-208ENST00000459947 CDK14O94921 469 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 ETS1P14921 441 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 DMPKQ09013 629 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 BNIP3Q12983 259 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 KIR2DS5Q14953 304 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 FASTKD1Q53R41 847 aaKnown RBP10.58□□□□□ -0.72
UBR4-208ENST00000459947 GPRC6AQ5T6X5 926 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 AGAP9Q5VTM2 703 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 DOK6Q6PKX4 331 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 RD3Q7Z3Z2 195 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 SDCCAG8Q86SQ7 713 aaPredicted RBP10.58□□□□□ -0.72
UBR4-208ENST00000459947 CEP112Q8N8E3 955 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 PDXPQ96GD0 296 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.58□□□□□ -0.72
UBR4-208ENST00000459947 FAM237BA0A1B0GVD1 139 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 PTGIRP43119 386 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 IL9RQ01113 521 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 ZRANB3Q5FWF4 1079 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 IZUMO3Q5VZ72 239 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 MRNIPQ6NTE8 343 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms