RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 GABRG3Q99928 467 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 IARS2Q9NSE4 1012 aaKnown RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 FKBPLQ9UIM3 349 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 PHTF1Q9UMS5 762 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 COQ6Q9Y2Z9 468 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 FAM169AQ9Y6X4 670 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 A0A087WUV0 522 aaPredicted RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 EXOC1LA0A1B0GW35 172 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 A0A1W2PP55 124 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 CCDC162PA2VCL2 907 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 CAPN8A6NHC0 703 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 GPR37O15354 613 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 USP1O94782 785 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 PRNPP04156 253 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 NUDT17P0C025 328 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 SDHBP21912 280 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 DRD3P35462 400 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 GMPRP36959 345 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 P2RY2P41231 377 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 MLLT3P42568 568 aaPredicted RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 PXNP49023 591 aaPredicted RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 ZNF140P52738 457 aaPredicted RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 RPS14P62263 151 aaKnown RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 DMPKQ09013 629 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 SEMA3AQ14563 771 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 CST6Q15828 149 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 INAQ16352 499 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 ZNF789Q5FWF6 425 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 BTN2A1Q7KYR7 527 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 HSD11B1LQ7Z5J1 315 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 THAP11Q96EK4 314 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 CERS2Q96G23 380 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 TTC25Q96NG3 672 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 UPK3BL1B0FP48 263 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 UPK3BL2E5RIL1 263 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 H3BQF6 201 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 PDLIM1O00151 329 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 ALDH1A2O94788 518 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 APBB3O95704 486 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 DCNP07585 359 aaKnown RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 C1SP09871 688 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 RPS2P15880 293 aaKnown RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 AOC1P19801 751 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 CA4P22748 312 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 GRK2P25098 689 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 MPP1Q00013 466 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 RALGDSQ12967 914 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 BMPR2Q13873 1038 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 TAF1AQ15573 450 aaPredicted RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 KRT71Q3SY84 523 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 KCTD16Q68DU8 428 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 FBXL19Q6PCT2 694 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 ZC3H14Q6PJT7 736 aaKnown RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 KCNMB4Q86W47 210 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 BPHLQ86WA6 291 aaPredicted RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 HDDC3Q8N4P3 179 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 ACVR1CQ8NER5 493 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 TMIEQ8NEW7 156 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 SCAMP4Q969E2 229 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 ATP6V1E2Q96A05 226 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 FUBP1Q96AE4 644 aaKnown RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 CDKN2AIPNLQ96HQ2 116 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 PAFAH2Q99487 392 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 ACSS3Q9H6R3 686 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 TBC1D17Q9HA65 648 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 ZFYVE1Q9HBF4 777 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 MAGEE1Q9HCI5 957 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 LTB4R2Q9NPC1 389 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 WNT16Q9UBV4 365 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 WDFY4Q6ZS81 3184 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 TCRBV21S2A2A0A5A6 115 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 KANSL1LA0AUZ9 987 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 MAGEB16A2A368 324 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 FAM159BA6NKW6 160 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 STX7O15400 261 aaKnown RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 SYF2O95926 243 aaKnown RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 GOT2P00505 430 aaKnown RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 ADRB3P13945 408 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 UGT1A6P19224 532 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 LPOP22079 712 aaPredicted RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 UGT1A1P22309 533 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 UGT1A4P22310 534 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 XPAP23025 273 aaPredicted RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 ITGB7P26010 798 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 GABRB3P28472 473 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 UGT1A3P35503 534 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 UGT1A5P35504 534 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 ETV3P41162 512 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 TAS2R38P59533 333 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 SPANXN3Q5MJ09 141 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 PIP5KL1Q5T9C9 394 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 BRAT1Q6PJG6 821 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 LVRNQ6Q4G3 990 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 FAM151BQ6UXP7 276 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 CEP128Q6ZU80 1094 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 Q6ZVL8 140 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 USP45Q70EL2 814 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 SLC44A2Q8IWA5 706 aaPredicted RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 PIANPQ8IYJ0 282 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms