RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 UGT1A3P35503 534 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 UGT1A5P35504 534 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 HMGCLP35914 325 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 DCDC1P59894 354 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 CHRNA6Q15825 494 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 INSCQ1MX18 579 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 ATP13A5Q4VNC0 1218 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 RBM44Q6ZP01 1051 aaKnown RBP18.5■□□□□ 0.55
USP39-209ENST00000458268 GPR156Q8NFN8 814 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 NXPE2Q96DL1 559 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 GFM1Q96RP9 751 aaKnown RBP18.5■□□□□ 0.55
USP39-209ENST00000458268 CARD9Q9H257 536 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 UGT1A7Q9HAW7 530 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 UGT1A10Q9HAW8 530 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 UGT1A8Q9HAW9 530 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 VPS18Q9P253 973 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 LRIT1Q9P2V4 623 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 ST14Q9Y5Y6 855 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 FRYQ5TBA9 3013 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 GLYATL1P3A0A0U1RQE8 302 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 CCDC78A2IDD5 438 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 TMEM8BA6NDV4 472 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 C2orf81A6NN90 581 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 DNAJC6O75061 913 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 FGGP02679 453 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 ETS1P14921 441 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 TPH1P17752 444 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 ADRA1AP35348 466 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 ACTN2P35609 894 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 CCL7P80098 99 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 CAMK2BQ13554 666 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 GTF2H3Q13889 308 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 LONRF2Q1L5Z9 754 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 PARP6Q2NL67 630 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 P3H1Q32P28 736 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 AMZ1Q400G9 498 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 ZNF662Q6ZS27 426 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 DCBLD1Q8N8Z6 715 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 CCDC89Q8N998 374 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 OR4K2Q8NGD2 314 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 TTC25Q96NG3 672 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 PPP1R2P1Q96PQ5 205 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 PLEKHG4BQ96PX9 1271 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 TLR10Q9BXR5 811 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 TRMT1Q9NXH9 659 aaKnown RBP18.49■□□□□ 0.55
USP39-209ENST00000458268 IL17CQ9P0M4 197 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 DNAJC16Q9Y2G8 782 aa18.49■□□□□ 0.55
USP39-209ENST00000458268 E7EVH7 732 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 CCL22O00626 93 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 LPOP22079 712 aaPredicted RBP18.48■□□□□ 0.55
USP39-209ENST00000458268 ALDH4A1P30038 563 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 AKT1P31749 480 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 TERF1P54274 439 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 SEPT7Q16181 437 aaKnown RBP18.48■□□□□ 0.55
USP39-209ENST00000458268 KCTD19Q17RG1 926 aaPredicted RBP18.48■□□□□ 0.55
USP39-209ENST00000458268 C3orf38Q5JPI3 329 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 CERCAMQ5T4B2 595 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 RANBP10Q6VN20 620 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 ADGRG6Q86SQ4 1221 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 ZNF761Q86XN6 746 aaPredicted RBP18.48■□□□□ 0.55
USP39-209ENST00000458268 TRAPPC5Q8IUR0 188 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 CCNJLQ8IV13 435 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 OR13C4Q8NGS5 318 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 LRRC40Q9H9A6 602 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 EPB41L5Q9HCM4 733 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 TRIM39Q9HCM9 518 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 IL26Q9NPH9 171 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 KLC4Q9NSK0 619 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.48■□□□□ 0.554e-10■■■□□ 17.5
USP39-209ENST00000458268 FKBPLQ9UIM3 349 aa18.48■□□□□ 0.55
USP39-209ENST00000458268 ATXN7L1Q9ULK2 861 aaPredicted RBP18.48■□□□□ 0.55
USP39-209ENST00000458268 KIF26BQ2KJY2 2108 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 NUAK1O60285 661 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 CDK14O94921 469 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 CRTAMO95727 393 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 MPOP05164 745 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 GLB1P16278 677 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 PBLDP30039 288 aaPredicted RBP18.47■□□□□ 0.55
USP39-209ENST00000458268 PEX6Q13608 980 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 LRP8Q14114 963 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 HLTFQ14527 1009 aaKnown RBP eCLIP18.47■□□□□ 0.55
USP39-209ENST00000458268 POU6F1Q14863 301 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 TAF1AQ15573 450 aaPredicted RBP18.47■□□□□ 0.55
USP39-209ENST00000458268 KHDC1Q4VXA5 237 aaKnown RBP18.47■□□□□ 0.55
USP39-209ENST00000458268 CDCP2Q5VXM1 449 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 PDPK2PQ6A1A2 396 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 OGFOD3Q6PK18 319 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 GSTA5Q7RTV2 222 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 LRRTM4Q86VH4 590 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 NAGSQ8N159 534 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 ARL14Q8N4G2 192 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 OR6C4Q8NGE1 309 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 SCARF2Q96GP6 870 aaPredicted RBP18.47■□□□□ 0.55
USP39-209ENST00000458268 ATXN7L3BQ96GX2 97 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 DCBLD2Q96PD2 775 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 FOXP3Q9BZS1 431 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 KCNF1Q9H3M0 494 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 LRRN3Q9H3W5 708 aa18.47■□□□□ 0.55
USP39-209ENST00000458268 NFKBIL1Q9UBC1 381 aaPredicted RBP18.47■□□□□ 0.55
USP39-209ENST00000458268 FAM8A1Q9UBU6 413 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms